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Query: LNPEP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LNPEP 0 2.718 0.680 0.260 0.752 0.610
LNPEP 0 2.718 0.910 -0.940 0.752 0.610

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LNPEP Phosphorylation S91 0.531 0.825 _SSGLRNS(ph)ATGYR_

Background Information for LNPEP:


Pubmed-LNPEP »
Uniprot-LNPEP »
Biogrid-LNPEP »
ProteomicsDB-LNPEP »

Tumorportal-LNPEP »
COSMIC-LNPEP »
GenomeRNAi-LNPEP »
Genecards-LNPEP


Protein-protein Interactions for LNPEP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait JUNB Cat. description Hein, Mann, Cell 2015
Category members IP bait LNPEP Cat. description Hein, Mann, Cell 2015
Category members IP bait BTNL8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C5orf28 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCL22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CD3E Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EDNRB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GLRA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPHA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR107 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HLA-DPA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HLA-DRA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LMAN2L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NAPRT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCGB1D1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCGB1D4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SIAE Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ST8SIA4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TNF Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LNPEP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Peptidase_M1_N IPR014782 0


Protein complexes (CORUM database) featuring LNPEP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LNPEP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members GO Category GO:0002474 antigen processing and presentation of peptide antigen via MHC class I Database 2.5
Category members GO Category GO:0000209 protein polyubiquitination Database 2.46
Category members Pathway Pathway_763 REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION 0 2.24
Category members GO Category GO:0042590 antigen processing and presentation of exogenous peptide antigen via MHC class I Database 2.21
Category members Pathway Pathway_455 PID_INSULIN_GLUCOSE_PATHWAY 0 1.7
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0007267 cell-cell signaling Database 0.94
Category members GO Category GO:0005765 lysosomal membrane Database 0.82
Category members Pathway Pathway_509 SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES 0 0.62
Category members GO Category GO:0030659 cytoplasmic vesicle membrane Database 0.62
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0030163 protein catabolic process Database 0.38
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0031905 early endosome lumen Database 0.26
Category members GO Category GO:0007565 female pregnancy Database 0.19
Category members GO Category GO:0004177 aminopeptidase activity Database 0.13
Category members Pathway Pathway_1270 REACTOME_ENDOSOMAL_VACUOLAR_PATHWAY 0 0.03
Category members GO Category GO:0002480 antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent Database 0.03
Category members Pathway Pathway_454 KEGG_RENIN_ANGIOTENSIN_SYSTEM 0 0
Category members GO Category GO:0006508 proteolysis Database 0
Category members GO Category GO:0008237 metallopeptidase activity Database 0


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