RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
IMPDH1	2	-0.140	-0.120		0.626	0.542
JMJD6	1	-2.420	4.570
SKI	1	-1.870	2.800		-1.139	-0.588
ZNF513	1	2.450	-1.420
RRM1	1			0.717	1.039	0.509
LAMB2	1	-1.480	2.650
CEP290	1	1.020	-0.690
CEP290	1	2.010	-1.090
GNB1	0	-0.700	0.650	0.713			0.504	0.538
GNB3	0	-1.020	1.280	0.713			0.504	0.538
BAX	0	1.590	-1.170				0.811	0.359
PVRL1	0	0.150	0.290
MDM1	0	-1.260	1.600
GNAT1	0	-0.110	-0.270
GNAT1	0	-0.110	-0.270	-0.166	-0.094	0.032	0.420	0.504
PFDN5	0	0.900	-0.490
MAX	0	-0.780	0.530		-0.276	0.290
MAX	0	-0.780	0.530
MYH10	0	0.740	-0.560	0.036			0.397	0.165
MYH10	0	0.740	-0.560		-0.265	-0.438
AGTPBP1	0	0.040	0.160				0.227	0.437
BMPR1B	0	-0.810	0.900
MERTK	0	-0.060	0.240
LPCAT1	0	0.790	-0.740	0.844			0.107	0.289
CHD7	0	0.220	-0.050	-1.168			0.026	0.297
IMPDH2	0	-1.000	1.830	0.860	0.260	0.421	1.006	0.467

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AGTPBP1	Ubiquitylation	K5		-0.263	_LK(gl)VIPEK_
AGTPBP1	Phosphorylation	T1167	0.976		_VT(ph)SPTTYVLDEDEPR_
AGTPBP1	Phosphorylation	S1168	1.039	0.594	_VTS(ph)PTTYVLDEDEPR_
BAX	Ubiquitylation	K57		-1.174	_MGGEAPELALDPVPQDASTK(gl)K_
BAX	Ubiquitylation	K58	-1.718	-1.174	_MGGEAPELALDPVPQDASTKK(gl)_
BAX	Ubiquitylation	K64	0.708	1.306	_LSECLK(gl)R_
BMPR1B	Ubiquitylation	K477	1.033		_EIVCIK(gl)K_
CEP290	Ubiquitylation	K593	-1.125		_K(gl)LDLLSLK_
CEP290	Ubiquitylation	K735	-1.199		_KEAINYSQQLAK(gl)ANLK_
CEP290	Ubiquitylation	K830	0.626		_EYLSEK(gl)ETWK_
CEP290	Ubiquitylation	K1178	-1.408		_DK(gl)EVESLR_
CEP290	Ubiquitylation	K1336	-0.794		_GLEELISTLK(gl)DTK_
CEP290	Ubiquitylation	K1552	-0.135		_LNQK(gl)EEVLKK_
CEP290	Ubiquitylation	K1682	0.578		_LQLQENHEDEVKK(gl)_
CHD7	Phosphorylation	S557		-0.452	_VPVHQHS(ph)PSEPFLEKPVPDM(ox)TQVSGPNAQLVK_
CHD7	Phosphorylation	S1874	-0.088	-0.155	_TPFKDEIDEFANS(ph)PSEDKEESMEIHATGK_
CHD7	Phosphorylation	S2533		-0.792	_RTS(ph)LSAEDAEVTK_
CHD7	Phosphorylation	S2559	-0.345	-0.513	_NIPS(ph)PGQLDPDTR_
CHD7	Phosphorylation	S2956	0.383	-0.248	_DGETLEGS(ph)DAEESLDK_
GNAT1	Ubiquitylation	K17	0.320		_ELEK(gl)KLK_
GNAT1	Ubiquitylation	K18	0.320		_ELEK(gl)KLK_
GNB1	Ubiquitylation	K23	-0.282		_K(gl)ACADATLSQITNNIDPVGR_
GNB1	Ubiquitylation	K209	-0.296	-0.249	_LFVSGACDASAK(gl)LWDVR_
GNB3	Ubiquitylation	K23	-0.282		_K(gl)ACADATLSQITNNIDPVGR_
GNB3	Ubiquitylation	K209	-0.296	-0.249	_LFVSGACDASAK(gl)LWDVR_
IMPDH1	Phosphorylation	T6	-0.746	-1.087	_(ac)M(ox)EGPLT(ph)PPPLQGGGAAAVPEPGAR_
IMPDH1	Ubiquitylation	K293	0.154	0.299	_GK(gl)LPIVNDCDELVAIIAR_
IMPDH1	Ubiquitylation	K327	2.285	1.616	_DSQK(gl)QLLCGAAVGTR_
IMPDH1	Ubiquitylation	K507		0.433	_GMGSLDAMEK(gl)SSSSQKR_
IMPDH1	Ubiquitylation	K523	0.629		_YFSEGDKVK(gl)_
IMPDH1	Ubiquitylation	K535	0.179	-0.096	_IAQGVSGSIQDK(gl)GSIQK_
IMPDH2	Ubiquitylation	K124	0.058		_YEQGFITDPVVLSPK(gl)DR_
IMPDH2	Ubiquitylation	K134	0.709	0.285	_VRDVFEAK(gl)AR_
IMPDH2	Phosphorylation	S160	0.758	0.744	_LVGIISS(ph)R_
IMPDH2	Ubiquitylation	K208	-0.482	-0.007	_GK(gl)LPIVNEDDELVAIIAR_
IMPDH2	Ubiquitylation	K293	0.119		_DK(gl)YPNLQVIGGNVVTAAQAK_
IMPDH2	Phosphorylation	S416	0.362	0.652	_GMGS(ph)LDAMDK_
IMPDH2	Ubiquitylation	K422	1.114	0.582	_GMGSLDAMDK(gl)HLSSQNR_
IMPDH2	Ubiquitylation	K450	0.313	0.467	_VAQGVSGAVQDK(gl)GSIHK_
JMJD6	Ubiquitylation	K167	-0.059	-0.130	_FFTDDLFQYAGEK(gl)R_
JMJD6	Ubiquitylation	K219		-0.251	_ELIK(gl)VTR_
LAMB2	Ubiquitylation	K494		-0.943	_GTVPGSTPCDPNSGSCYCK(gl)R_
LAMB2	Ubiquitylation	K1769		-0.028	_ALESK(gl)AAQLDGLEAR_
LPCAT1	Ubiquitylation	K191	-1.958	-0.654	_TVEEIK(gl)R_
LPCAT1	Ubiquitylation	K221		-2.397	_TCLITFK(gl)PGAFIPGAPVQPVVLR_
LPCAT1	Ubiquitylation	K347	-0.307		_GLGLKPEK(gl)_
MAX	Phosphorylation	S2	0.341	-0.060	_(ac)S(ph)DNDDIEVES(ph)DEEQPR_
MAX	Phosphorylation	S2	0.510	0.568	_(ac)S(ph)DNDDIEVESDADKR_
MAX	Phosphorylation	S11	0.341	-0.060	_(ac)S(ph)DNDDIEVES(ph)DEEQPR_
MAX	Phosphorylation	S11	-0.408	0.069	_(ac)S(ph)DNDDIEVES(ph)DADKR_
MAX	Ubiquitylation	K57	-0.903	0.246	_DSVPSLQGEK(gl)ASR_
MDM1	Phosphorylation	S242	0.440	-0.515	_GLS(ph)PVKEPK_
MDM1	Phosphorylation	S263		0.312	_NLETVS(ph)PERK_
MDM1	Phosphorylation	S543	-0.064	-0.063	_THHDLTTPAVGGAVLVS(ph)PSK_
MERTK	Ubiquitylation	K856	0.219		_LQLEK(gl)LLESLPDVR_
MYH10	Phosphorylation	S225		-0.296	_DHNIPQES(ph)PKPVK_
MYH10	Ubiquitylation	K256	0.402		_QLLQANPILESFGNAKTVK(gl)_
MYH10	Ubiquitylation	K899	-1.210		_QEEELQAK(gl)DEELLK_
MYH10	Phosphorylation	S1979	-0.233	-0.052	_GGPISFS(ph)SSR_
MYH10	Phosphorylation	S1980	-0.231		_GGPISFSS(ph)SR_
MYH10	Phosphorylation	S1981	-0.541	-0.089	_GGPISFSSS(ph)R_
MYH10	Phosphorylation	S1998	0.372	0.302	_QLHLEGASLELS(ph)DDDTESK_
PFDN5	Ubiquitylation	K42		0.746	_VVQTK(gl)YVEAK_
PFDN5	Ubiquitylation	K55	0.014	0.436	_DCLNVLNK(gl)SNEGK_
PFDN5	Ubiquitylation	K104	0.185	0.595	_TAEDAKDFFK(gl)R_
PFDN5	Ubiquitylation	K112	-0.336		_KIDFLTK(gl)QMEK_
PFDN5	Ubiquitylation	K153	-0.155	0.828	_IQQLTALGAAQATAK(gl)A_
PVRL1	Phosphorylation	S434		-0.333	_AGPLGGS(ph)SYEEEEEEEEGGGGGER_
RRM1	Ubiquitylation	K158	0.366	0.759	_SYLLK(gl)INGK_
RRM1	Ubiquitylation	K376	0.409	0.370	_LYASYEK(gl)QGR_
RRM1	Ubiquitylation	K414		0.015	_K(gl)SNQQNLGTIK_
RRM1	Ubiquitylation	K465	-0.049	0.272	_K(gl)LAEVTK_
RRM1	Ubiquitylation	K471	1.117	1.347	_LAEVTK(gl)VVVR_
RRM1	Ubiquitylation	K496	0.699	1.559	_IIDINYYPVPEACLSNK(gl)R_
RRM1	Ubiquitylation	K587		0.487	_VLKEK(gl)IAK_
RRM1	Ubiquitylation	K590	-0.395	0.551	_IAK(gl)YGIR_
RRM1	Ubiquitylation	K689		0.606	_TVWEISQK(gl)TVLK_
RRM1	Ubiquitylation	K693		0.427	_TVLK(gl)MAAER_
RRM1	Ubiquitylation	K733		0.748	_QGLK(gl)TGMYYLR_
RRM1	Ubiquitylation	K754	-0.746	-1.217	_TRPAANPIQFTLNK(gl)EK_
RRM1	Ubiquitylation	K756	-0.746	-1.217	_TRPAANPIQFTLNK(gl)EK_
SKI	Ubiquitylation	K294	-0.126	-0.054	_AYILLSQDYTGK(gl)EEQAR_
SKI	Ubiquitylation	K365	-0.244	-0.390	_TLAGSSNK(gl)SLGCVHPR_
SKI	Phosphorylation	S431		-0.475	_VVS(ph)SPPCAAAVSR_
SKI	Phosphorylation	S432	-0.742	-0.438	_VVSS(ph)PPCAAAVSR_
SKI	Phosphorylation	S480	-1.160	-1.491	_LTVDTPGAPETLAPVAAPEEDKDS(ph)EAEVEVESR_
ZNF513	Phosphorylation	S253	-1.477	-0.499	_PARPPS(ph)PTEQEGAVPR_