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Query: JMJD6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
JMJD6 1 4.381 -2.420 4.570

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
JMJD6 Ubiquitylation K167 -0.059 -0.130 _FFTDDLFQYAGEK(gl)R_
JMJD6 Ubiquitylation K219 -0.251 _ELIK(gl)VTR_

Background Information for JMJD6:


Pubmed-JMJD6 »
Uniprot-JMJD6 »
Biogrid-JMJD6 »
ProteomicsDB-JMJD6 »

Tumorportal-JMJD6 »
COSMIC-JMJD6 »
GenomeRNAi-JMJD6 »
Genecards-JMJD6


Protein-protein Interactions for JMJD6
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait NAF1 Cat. description Hein, Mann, Cell 2015
Category members IP bait AKAP17A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ARL6IP4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C11orf57 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CLK3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DHX8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait JMJD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NKAP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PIP4K2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRPF40A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RSRC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TULP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait U2AF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZCCHC17 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZRSR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in JMJD6
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members JmjC_dom IPR003347 0


Protein complexes (CORUM database) featuring JMJD6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring JMJD6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0006915 apoptotic process Database 2.12
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0030324 lung development Database 0.39
Category members GO Category GO:0042802 identical protein binding Database 0.26
Category members GO Category GO:0002040 sprouting angiogenesis Database 0.12
Category members GO Category GO:0007166 cell surface receptor signaling pathway Database 0.1
Category members GO Category GO:0070782 phosphatidylserine exposure on apoptotic cell surface Database 0.08
Category members GO Category GO:0005506 iron ion binding Database 0.04
Category members GO Category GO:0033077 T cell differentiation in thymus Database 0.03
Category members GO Category GO:0001568 blood vessel development Database 0
Category members GO Category GO:0001822 kidney development Database 0
Category members GO Category GO:0003727 single-stranded RNA binding Database 0
Category members GO Category GO:0004872 receptor activity Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007507 heart development Database 0
Category members GO Category GO:0042116 macrophage activation Database 0
Category members GO Category GO:0043277 apoptotic cell clearance Database 0
Category members GO Category GO:0043654 recognition of apoptotic cell Database 0
Category members GO Category GO:0048024 regulation of mRNA splicing, via spliceosome Database 0
Category members GO Category GO:0048821 erythrocyte development Database 0
Category members GO Category GO:0060041 retina development in camera-type eye Database 0


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