bioLOGIC Category
Results for the Category
regulation of mRNA splicing, via spliceosome
(GO:0048024)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
SRPK1
|
2
|
-2.020
|
3.440
|
|
|
|
|
|
|
SRPK1
|
2
|
-2.020
|
3.440
|
|
-0.227
|
0.204
|
|
|
|
SRPK1
|
2
|
-2.020
|
3.440
|
1.541
|
|
|
-0.249
|
-0.327
|
|
JMJD6
|
1
|
-2.420
|
4.570
|
|
|
|
|
|
|
SRPK3
|
1
|
-0.520
|
0.710
|
1.541
|
|
|
-0.249
|
-0.327
|
|
CWC22
|
1
|
-2.870
|
5.920
|
-1.138
|
|
|
-0.403
|
-0.233
|
|
TIA1
|
0
|
-1.050
|
1.250
|
|
|
|
|
|
|
TIA1
|
0
|
-1.050
|
1.250
|
-0.721
|
-0.259
|
-0.319
|
-0.332
|
-0.199
|
|
TIA1
|
0
|
-1.050
|
1.250
|
-0.455
|
|
|
0.130
|
0.623
|
|
SRPK2
|
0
|
-0.090
|
0.510
|
|
|
|
|
-0.634
|
| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
CWC22
|
Phosphorylation
|
S829
|
0.483
|
0.377
|
_RNS(ph)FSENEK_
|
|
JMJD6
|
Ubiquitylation
|
K167
|
-0.059
|
-0.130
|
_FFTDDLFQYAGEK(gl)R_
|
|
JMJD6
|
Ubiquitylation
|
K219
|
|
-0.251
|
_ELIK(gl)VTR_
|
|
SRPK1
|
Phosphorylation
|
S67
|
-1.128
|
-1.153
|
_GSAPHSESDLPEQEEEILGS(ph)DDDEQEDPNDYCK_
|
|
SRPK1
|
Ubiquitylation
|
K579
|
0.354
|
|
_K(gl)LIVAGK_
|
|
SRPK1
|
Ubiquitylation
|
K585
|
0.939
|
|
_KLIVAGK(gl)YSK_
|
|
SRPK2
|
Phosphorylation
|
S483
|
-1.638
|
|
_IPESQFPEFSTSLFSGSLEPVACGSVLSEGSPLTEQEES(ph)SPSHDR_
|
|
SRPK2
|
Phosphorylation
|
S496
|
0.096
|
|
_TVSAS(ph)STGDLPK_
|
|
SRPK2
|
Phosphorylation
|
S497
|
-0.015
|
-0.154
|
_TVSASS(ph)TGDLPK_
|
|
SRPK2
|
Ubiquitylation
|
K618
|
0.453
|
|
_HFALSGK(gl)YSR_
|
|
TIA1
|
Ubiquitylation
|
K91
|
0.902
|
|
_VNWATTPSSQKK(gl)_
|
© Copyright Svejstrup Laboratory 2015