RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MYO3A	2	-1.560	3.110
EYA4	2	-0.120	0.100
FREM2	2	2.330	-0.650
HOXA13	1	-1.850	3.840		-0.027	0.427
HOXA13	1	-1.850	3.840	-1.413				0.651
MYO6	1	-1.580	2.560	0.037			0.700	0.607
MYO6	1	-1.580	2.560		-0.533
PDGFA	1	0.190	-0.340		-2.109	1.885
FGFR3	0	-1.120	1.390
JAG1	0	-0.260	0.070
TGFB1	0	-0.550	1.050
GLI3	0	-0.980	1.650
LIN7A	0	0.450	-0.640
LIN7A	0	0.450	-0.640	0.413			0.576	0.542
PROX1	0	0.800	-0.550
TGFB3	0	0.900	-0.540
HPCA	0	0.380	-0.650
SIX1	0	1.730	-1.230		-0.334	0.495
ATP2B2	0	1.540	-0.900				0.593	0.487
ADGRV1	0	-1.630	2.470
PTPN11	0	-0.210	-0.400	0.644			1.053	0.451
SOX2	0	-0.250	0.870
POU3F4	0	0.700	-0.280

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADGRV1	Ubiquitylation	K548		0.402	_LGGTK(gl)GDVR_
ADGRV1	Ubiquitylation	K589		-1.152	_RNDLIFPEQK(gl)TQVTTK_
ADGRV1	Ubiquitylation	K756		0.252	_VNVENQVLK(gl)SGYTSR_
ADGRV1	Ubiquitylation	K1453		-0.536	_SLK(gl)GEAITDGPGILR_
ATP2B2	Ubiquitylation	K15	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Phosphorylation	S17	0.515	0.902	_NS(ph)LKEANHDGDFGITLAELR_
ATP2B2	Ubiquitylation	K19	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Ubiquitylation	K48	1.326		_K(gl)IQESYGDVYGICTK_
ATP2B2	Ubiquitylation	K62	0.733		_IQESYGDVYGICTK(gl)LK_
ATP2B2	Ubiquitylation	K64	0.642	0.801	_LK(gl)TSPNEGLSGNPADLER_
ATP2B2	Ubiquitylation	K193	-0.102	0.773	_IEQEQK(gl)FTVIR_
ATP2B2	Ubiquitylation	K365		0.997	_SVLQGK(gl)LTK_
ATP2B2	Ubiquitylation	K747	1.309		_NEK(gl)GEIEQER_
ATP2B2	Ubiquitylation	K773		-0.186	_SSPTDK(gl)HTLVK_
ATP2B2	Ubiquitylation	K807	0.010	1.083	_QVVAVTGDGTNDGPALKK(gl)_
ATP2B2	Ubiquitylation	K921	-0.811	0.202	_NK(gl)PLISR_
ATP2B2	Phosphorylation	S1177	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1178	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1193	-0.342	-0.629	_IEDS(ph)EPHIPLIDDTDAEDDAPTKR_
EYA4	Phosphorylation	S4	2.607	2.311	_(ac)M(ox)EDS(ph)QDLNEQSVK_
EYA4	Phosphorylation	S367	-1.041	-1.090	_NNPS(ph)PPPDSDLER_
EYA4	Ubiquitylation	K513		-0.108	_NNVGGLLGPAK(gl)R_
EYA4	Ubiquitylation	K587		-1.219	_IGK(gl)ESCFER_
FGFR3	Ubiquitylation	K205		-0.115	_IGGIK(gl)LR_
FREM2	Ubiquitylation	K299		2.113	_GAPVGSPALK(gl)R_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
HOXA13	Ubiquitylation	K335	0.431	0.162	_VQLK(gl)ELER_
HPCA	Ubiquitylation	K174	-1.077		_GAK(gl)SDPSIVR_
JAG1	Ubiquitylation	K1142	-0.783		_HGANTVPIKDYENK(gl)_
LIN7A	Ubiquitylation	K91	0.346		_ATAK(gl)ATVAAFAASEGHSHPR_
MYO3A	Ubiquitylation	K399	2.702		_LYIGSK(gl)R_
MYO6	Phosphorylation	S266		0.008	_LHLS(ph)SPDNFR_
MYO6	Phosphorylation	S267	-0.106	0.501	_LHLSS(ph)PDNFR_
MYO6	Ubiquitylation	K285	0.079		_YFANK(gl)ETDKQILQNR_
MYO6	Ubiquitylation	K408	0.078		_GTVIK(gl)VPLKVEQANNAR_
MYO6	Ubiquitylation	K634	0.366		_ELFESSTNNNKDTKQK(gl)_
MYO6	Ubiquitylation	K993	-0.079	1.133	_QK(gl)EEESQQQAVLEQERR_
MYO6	Ubiquitylation	K1053		-1.790	_NDGTRPK(gl)MTPEQMAK_
MYO6	Ubiquitylation	K1077	-0.135	0.805	_GPAVLATK(gl)AAAGTK_
MYO6	Ubiquitylation	K1089	0.440	1.326	_YDLSK(gl)WK_
MYO6	Ubiquitylation	K1120	0.732	0.435	_LK(gl)VYHAWK_
MYO6	Ubiquitylation	K1126	0.296		_VYHAWK(gl)SK_
MYO6	Ubiquitylation	K1142	-1.182	-0.570	_NTETEQRAPK(gl)SVTDYAQQNPAAQIPAR_
MYO6	Ubiquitylation	K1184	-1.200	-0.624	_IPFIRPADQYK(gl)DPQSK_
POU3F4	Ubiquitylation	K377	0.051	-0.035	_LK(gl)PLLNK_
PROX1	Phosphorylation	S511	0.460	0.502	_DRAS(ph)PESLDLTR_
PTPN11	Ubiquitylation	K124	0.562		_EAEK(gl)LLTEK_
SIX1	Ubiquitylation	K53	0.475		_AK(gl)AVVAFHR_
SOX2	Phosphorylation	S251	0.157	-0.109	_SEASSS(ph)PPVVTSSSHSR_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFB3	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_