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Query: LIN7A

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LIN7A 0 1.877 0.450 -0.640
LIN7A 0 1.877 0.450 -0.640 0.413 0.576 0.542

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LIN7A Ubiquitylation K91 0.346 _ATAK(gl)ATVAAFAASEGHSHPR_

Background Information for LIN7A:


Pubmed-LIN7A »
Uniprot-LIN7A »
Biogrid-LIN7A »
ProteomicsDB-LIN7A »

Tumorportal-LIN7A »
COSMIC-LIN7A »
GenomeRNAi-LIN7A »
Genecards-LIN7A


Protein-protein Interactions for LIN7A
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MPP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MPP5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NSUN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC20A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LIN7A
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members L27 IPR004172 1.84
Category members L27_C IPR014775 0.33
Category members PDZ IPR001478 0.15
Category members Lin-7_homologue IPR017365 0


Protein complexes (CORUM database) featuring LIN7A
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1089 VAM1-VELI1 complex Database 0
Category members Corum 3207 LIN2-LIN7-SAP97-MINT1 complex Database 0
Category members Corum 3208 LIN2-LIN7 complex Database 0


Categories featuring LIN7A
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0005923 tight junction Database 0.69
Category members GO Category GO:0006461 protein complex assembly Database 0.57
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0030165 PDZ domain binding Database 0.29
Category members GO Category GO:0006887 exocytosis Database 0.2
Category members GO Category GO:0043005 neuron projection Database 0.08
Category members GO Category GO:0045211 postsynaptic membrane Database 0.06
Category members GO Category GO:0045202 synapse Database 0.06
Category members GO Category GO:0016323 basolateral plasma membrane Database 0.04
Category members Pathway Pathway_882 BIOCARTA_TID_PATHWAY 0 0
Category members GO Category GO:0007269 neurotransmitter secretion Database 0
Category members GO Category GO:0014069 postsynaptic density Database 0
Category members GO Category GO:0048489 synaptic vesicle transport Database 0
Category members GO Category GO:0048839 inner ear development Database 0


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