RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
HDAC9	1	-1.710	3.420
MSH2	1	-0.130	0.010	0.224	0.457	0.838	0.840	0.366
VCAM1	1	1.250	-0.880				-0.412	-0.373
SP3	1	2.510	-0.930	-0.403			0.807	0.836
HDAC4	0	1.730	-0.740
TCF3	0	0.270	-0.020
TPD52	0	-0.530	0.450
TPD52	0	-0.530	0.450	0.917	0.236	0.484	0.821	1.162
HDAC5	0	-0.830	1.270
ITGA4	0	-0.620	0.820
GON4L	0	0.300	-0.370
GON4L	0	0.300	-0.370				1.095	-0.247
BCL11A	0	0.570	-0.910			-0.307
BCL11A	0	0.570	-0.910		0.205	0.251
POLM	0	-0.250	1.450
PIK3R1	0	1.910	-1.220				-0.441	0.147
ITGB1	0	0.390	-0.650				0.101	-0.036
ADAM17	0	0.520	-0.620
CEBPG	0	-1.150	1.620
RBPJ	0	1.900	-0.160	-0.367	0.284	0.723	-0.090	0.134
BCL2	0	0.910	-0.740
PTPN2	0	1.210	-0.730

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADAM17	Phosphorylation	S791	-0.594	0.152	_S(ph)FEDLTDHPVTR_
BCL11A	Phosphorylation	S86	-0.529	-0.504	_AVDKPPS(ph)PSPIEMK_
BCL11A	Phosphorylation	S88	-0.768	-0.180	_AVDKPPSPS(ph)PIEM(ox)K_
BCL11A	Phosphorylation	S205	-0.387	0.246	_IYLESEHGS(ph)PLTPR_
BCL11A	Phosphorylation	S328	-2.457	-1.626	_ELAGNTSS(ph)PPLSPGRPSPMQR_
BCL11A	Phosphorylation	S447	0.783	0.547	_SDDGLSTASS(ph)PEPGTSDLVGSASSALK_
BCL11A	Phosphorylation	S608	0.412	0.400	_GCS(ph)PGESASGGLSK_
BCL11A	Phosphorylation	S625	0.458	0.304	_LLLGS(ph)PSSLSPFSK_
BCL11A	Phosphorylation	S630	-0.946	-1.128	_LLLGSPSSLS(ph)PFSK_
BCL11A	Phosphorylation	T701	0.381	0.980	_FST(ph)PPGELDGGISGR_
BCL11A	Phosphorylation	S718		0.367	_SGTGS(ph)GGSTPHISGPGPGRPSSK_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
CEBPG	Ubiquitylation	K98	-0.339		_VNQLK(gl)EENERLEAK_
CEBPG	Ubiquitylation	K113	0.032	0.273	_LLTK(gl)ELSVLK_
GON4L	Phosphorylation	S346		-0.521	_GVVIPTWNIS(ph)PIKK_
GON4L	Phosphorylation	S803	-0.117	-0.339	_LEPQELS(ph)PLSATVFPK_
HDAC4	Phosphorylation	S265		-0.390	_RS(ph)SPLLR_
HDAC4	Phosphorylation	S266	-0.821	-0.598	_RSS(ph)PLLR_
HDAC4	Phosphorylation	S632	-1.146	-0.837	_AQS(ph)SPASATFPVSVQEPPTKPR_
HDAC5	Phosphorylation	S265		-0.390	_RS(ph)SPLLR_
HDAC5	Phosphorylation	S266	-0.821	-0.598	_RSS(ph)PLLR_
HDAC9	Phosphorylation	S265		-0.390	_RS(ph)SPLLR_
HDAC9	Phosphorylation	S266	-0.821	-0.598	_RSS(ph)PLLR_
ITGA4	Phosphorylation	S1021	-0.095	1.014	_RDS(ph)WSYINSK_
ITGB1	Ubiquitylation	K774	0.402		_MNAK(gl)WDTGENPIYK_
ITGB1	Ubiquitylation	K784	-0.172	0.350	_WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1	Ubiquitylation	K794	0.755	0.604	_SAVTTVVNPK(gl)YEGK_
MSH2	Ubiquitylation	K212		-0.233	_ECVLPGGETAGDMGK(gl)LR_
MSH2	Ubiquitylation	K249	0.461		_K(gl)GEQMNSAVLPEMENQVAVSSLSAVIK_
MSH2	Ubiquitylation	K347		2.867	_LVNQWIK(gl)QPLMDK_
MSH2	Ubiquitylation	K531	1.040		_VTCKEEK(gl)VLR_
MSH2	Ubiquitylation	K555		0.164	_FTNSK(gl)LTSLNEEYTK_
MSH2	Ubiquitylation	K635		-0.376	_IILK(gl)ASR_
POLM	Phosphorylation	S12	-0.628	-0.519	_VGS(ph)PSGDAASSTPPSTR_
PTPN2	Phosphorylation	S304	-0.873	-0.641	_ELSKEDLSPAFDHS(ph)PNK_
TCF3	Phosphorylation	S328	0.865	0.756	_AGAPGALS(ph)PSYDGGLHGLQSK_
TPD52	Ubiquitylation	K100	-0.081		_VEEEIQTLSQVLAAK(gl)EK_
TPD52	Ubiquitylation	K102	0.492		_VEEEIQTLSQVLAAKEK(gl)_
TPD52	Ubiquitylation	K169	-0.246		_KLEDVK(gl)NSPTFK_
TPD52	Phosphorylation	S171	-0.363	0.174	_KLEDVKNS(ph)PTFK_
TPD52	Phosphorylation	T173	-0.047	0.289	_KLEDVKNSPT(ph)FK_
TPD52	Phosphorylation	S176	0.349	0.394	_S(ph)FEEKVENLK_
VCAM1	Ubiquitylation	K263	0.419	-0.113	_STLQIGK(gl)R_
VCAM1	Phosphorylation	S276		0.013	_RDANSSFFDNSSS(ph)PHLLDQLK_
VCAM1	Ubiquitylation	K293		-0.460	_NK(gl)INELELR_
VCAM1	Ubiquitylation	K326		-0.856	_FQELQLQLEKAK(gl)_
VCAM1	Ubiquitylation	K513		-1.965	_NIK(gl)QCLNQSQNFAEEMK_
VCAM1	Ubiquitylation	K555	-0.739	-0.237	_INQQENSLTLEK(gl)LK_
VCAM1	Ubiquitylation	K606		0.112	_ALLSALELKK(gl)_
VCAM1	Ubiquitylation	K657	-0.600	0.172	_TQQIK(gl)SHEYNER_
VCAM1	Ubiquitylation	K689		-0.011	_NLHNVLDSK(gl)SVEVETQK_
VCAM1	Ubiquitylation	K770	-1.636	-0.056	_SK(gl)DASLVTNEDHQR_
VCAM1	Ubiquitylation	K823	-1.207	-0.686	_LEADQSPK(gl)NSAILQNR_
VCAM1	Phosphorylation	S834		1.282	_VDS(ph)LEFSLESQK_
VCAM1	Ubiquitylation	K1022	-0.770		_SISELSDQYKQEK(gl)_
VCAM1	Phosphorylation	S1255		2.400	_GDLETSNLQDMQS(ph)QEISGLKDCEIDAEEK_
VCAM1	Phosphorylation	S1747		-0.145	_LQLQGLDLS(ph)SR_
VCAM1	Phosphorylation	S1750	-1.171	-0.117	_S(ph)LLGIDTEDAIQGR_
VCAM1	Phosphorylation	T1825		-0.475	_ITETGAVKPTGECSGEQSPDT(ph)NYEPPGEDK_
VCAM1	Ubiquitylation	K2069	-0.699		_GELDTMSKK(gl)_
VCAM1	Ubiquitylation	K2713		0.058	_MTAK(gl)ETELQR_
VCAM1	Ubiquitylation	K2739	-1.524		_TAELQEELSGEK(gl)NR_
VCAM1	Phosphorylation	S2996	-1.047	-1.005	_GS(ph)PLLGPVVPGPS(ph)PIPSVTEK_
VCAM1	Phosphorylation	S3007	-0.910	-2.059	_GS(ph)PLLGPVVPGPS(ph)PIPSVTEK_
VCAM1	Phosphorylation	S3119	-0.975	-0.328	_LALS(ph)PLSLGK_
VCAM1	Phosphorylation	S3150	1.391	1.078	_VAQRS(ph)PVDSGTILR_
VCAM1	Phosphorylation	S3175	1.052	0.884	_SVPVNNLPERS(ph)PTDSPR_