bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: TPD52

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TPD52 0 5.305 -0.530 0.450
TPD52 0 5.305 -0.530 0.450 0.917 0.236 0.484 0.821 1.162

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TPD52 Phosphorylation S176 0.349 0.394 _S(ph)FEEKVENLK_
TPD52 Phosphorylation T173 -0.047 0.289 _KLEDVKNSPT(ph)FK_
TPD52 Phosphorylation S171 -0.363 0.174 _KLEDVKNS(ph)PTFK_
TPD52 Ubiquitylation K100 -0.081 _VEEEIQTLSQVLAAK(gl)EK_
TPD52 Ubiquitylation K102 0.492 _VEEEIQTLSQVLAAKEK(gl)_
TPD52 Ubiquitylation K169 -0.246 _KLEDVK(gl)NSPTFK_

Background Information for TPD52:


Pubmed-TPD52 »
Uniprot-TPD52 »
Biogrid-TPD52 »
ProteomicsDB-TPD52 »

Tumorportal-TPD52 »
COSMIC-TPD52 »
GenomeRNAi-TPD52 »
Genecards-TPD52


Protein-protein Interactions for TPD52
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CBX1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CD2AP Cat. description Hein, Mann, Cell 2015
Category members IP bait DCLRE1B Cat. description Hein, Mann, Cell 2015
Category members IP bait DCTN3 Cat. description Hein, Mann, Cell 2015
Category members IP bait DYNC1H1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait JUP Cat. description Hein, Mann, Cell 2015
Category members IP bait MTX2 Cat. description Hein, Mann, Cell 2015
Category members IP bait NEDD1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SRP72 Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TSNAX Cat. description Hein, Mann, Cell 2015
Category members IP bait CTNNA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MEAF6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TPD52L2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZBTB48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF133 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF169 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TPD52
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TPD52 IPR007327 0.47


Protein complexes (CORUM database) featuring TPD52
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TPD52
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members Pathway Pathway_475 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0 0.98
Category members Pathway Pathway_520 REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 0 0.78
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28
Category members GO Category GO:0005509 calcium ion binding Database 0.11
Category members GO Category GO:0009653 anatomical structure morphogenesis Database 0
Category members GO Category GO:0030183 B cell differentiation Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0046903 secretion Database 0


.

© Copyright Svejstrup Laboratory 2015