RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
OXCT1	1	0.450	-0.370		2.793		0.677	0.862
HMGCS1	1	-1.450	3.080	-0.209				0.030
ANXA1	1	1.050	-0.850				1.883
MSI1	1	-0.810	1.480	-1.024			0.767	3.478
HADH	1	-0.250	-0.080		2.056		0.819	0.176
LYN	1	-1.790	3.770
LYN	1	-1.790	3.770
BAD	0	-0.660	1.190
ME1	0
ACAT1	0	-0.180	0.310	-0.044	0.452	-0.353	0.411	0.354
NCOA1	0	1.240	-0.460
SRF	0	0.670	-1.020
DHCR24	0	1.100	-0.830				0.024	-0.083
SNRPN	0	-1.150	1.460	0.279	-0.218	0.342	0.246	0.550
SNRPN	0	1.390	-0.910	0.279	-0.218	0.342	0.246	0.550
MSI2	0	-0.360	0.880	-0.604	-0.503	-0.428	0.190	0.347
NKX2-1	0	-0.730	0.480		0.174	0.236
NKX2-1	0	-0.730	0.480				-0.123
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
MMS19	0	0.790	-0.240				0.022	0.032
AGL	0	0.770	-1.020	0.022	-1.155
H3F3A	0	-0.610	0.000	-0.645
H3F3C	0			-0.645
HIST2H3A	0			-0.645
HIST2H3C	0	-0.950	1.680	-0.645
HIST2H3D	0			-0.645
HIST3H3	0	-0.240	0.240	-0.645
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
UQCRFS1	0	0.580	-0.380
UQCRFS1	0	0.580	-0.380		0.455	-1.390
FOXG1	0	-0.510	1.000	-1.217	-0.424	0.659
FOXG1	0	0.550	-0.250	-1.217	-0.424	0.659
LONP1	0	-0.080	-0.060	0.483	0.449	-1.109	1.066	0.781
NCOA6	0	-0.430	0.770				-0.167	0.096
RBM14	0	-0.750	1.640	-0.862	-1.197	-0.121	0.758	0.178
RBM14	0	0.230	-0.290	-0.862	-1.197	-0.121	0.758	0.178

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
BAD	Phosphorylation	S74	-0.904	-0.452	_HS(ph)SYPAGTEDDEGM(ox)GEEPSPFR_
BAD	Phosphorylation	S75	-0.914	-0.660	_HSS(ph)YPAGTEDDEGMGEEPSPFR_
BAD	Phosphorylation	S97		0.056	_S(ph)RSAPPNLWAAQR_
BAD	Phosphorylation	S99	-0.299	0.161	_S(ph)APPNLWAAQR_
BAD	Phosphorylation	S118	1.277	1.089	_RM(ox)S(ph)DEFVDSFKK_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
DHCR24	Ubiquitylation	K76	-0.970	0.315	_VRDIQK(gl)QVR_
DHCR24	Ubiquitylation	K254		-0.170	_GLEAICAK(gl)FTHESQR_
DHCR24	Ubiquitylation	K313		0.393	_HVENYLK(gl)TNR_
DHCR24	Ubiquitylation	K367	-0.346	-0.263	_ISLLK(gl)LTQGETLR_
DHCR24	Ubiquitylation	K459	-0.920	-0.275	_QLEK(gl)FVR_
DHCR24	Ubiquitylation	K496	-0.539	-0.460	_EK(gl)LGCQDAFPEVYDK_
DHCR24	Ubiquitylation	K509		-0.754	_LGCQDAFPEVYDK(gl)ICK_
FOXG1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXG1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXG1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXG1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXG1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXG1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXG1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
HMGCS1	Phosphorylation	S4	-1.161	-1.052	_PGS(ph)LPLNAEACWPK_
HMGCS1	Ubiquitylation	K100		-0.673	_LEVGTETIIDK(gl)SK_
HMGCS1	Ubiquitylation	K102	-1.761	-0.427	_LEVGTETIIDKSK(gl)_
HMGCS1	Ubiquitylation	K273	-0.550	-0.790	_LVQK(gl)SLAR_
HMGCS1	Ubiquitylation	K321	-0.588	-0.833	_AFMK(gl)ASSELFSQK_
HMGCS1	Ubiquitylation	K330		-0.934	_ASSELFSQK(gl)TK_
HMGCS1	Ubiquitylation	K332	-0.326		_ASSELFSQKTK(gl)_
HMGCS1	Ubiquitylation	K409		-0.898	_ITASLCDLK(gl)SR_
HMGCS1	Ubiquitylation	K428		-1.720	_TGVAPDVFAENMK(gl)LR_
HMGCS1	Phosphorylation	S495	-1.763	-1.842	_RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK_
LYN	Ubiquitylation	K20	-0.592		_GKDSLSDDGVDLK(gl)TQPVR_
LYN	Ubiquitylation	K40	0.100		_DPTSNK(gl)QQRPVPESQLLPGQR_
LYN	Phosphorylation	S104	0.944	0.841	_DSLS(ph)DDGVDLK_
LYN	Ubiquitylation	K213	0.441		_HYQK(gl)QADGLCR_
LYN	Ubiquitylation	K477	-0.191		_VENCPDELYDIMK(gl)MCWK_
ME1	Ubiquitylation	K422		-0.582	_AECSAEQCYK(gl)ITK_
ME1	Ubiquitylation	K512	0.582	-0.154	_DVSLK(gl)IAEK_
ME1	Ubiquitylation	K516	0.190		_IAEK(gl)IVK_
ME1	Ubiquitylation	K536		-1.965	_TATVYPEPQNK(gl)EAFVR_
MMS19	Ubiquitylation	K394		-1.127	_LVWPSAK(gl)_
MMS19	Ubiquitylation	K517		-0.398	_LSFLK(gl)EDSQSCR_
MSI1	Phosphorylation	S12	-0.840	-0.920	_(ac)M(ox)ETDAPQPGLAS(ph)PDSPHDPCK_
MSI1	Phosphorylation	S15	-0.989	-1.151	_(ac)M(ox)ETDAPQPGLASPDS(ph)PHDPCK_
MSI1	Ubiquitylation	K58	-0.580	-0.378	_ECLVMRDPLTK(gl)R_
MSI1	Phosphorylation	S191	0.551	0.401	_EVMS(ph)PTGSAR_
MSI2	Ubiquitylation	K59	-0.142	-0.094	_ECMVMRDPTTK(gl)R_
MSI2	Ubiquitylation	K145	-0.244	-0.474	_VEDAMLMFDK(gl)TTNR_
NCOA1	Phosphorylation	S22	0.503	0.810	_KGS(ph)PCDTLASSTEK_
RBM14	Ubiquitylation	K149	-0.268	-0.370	_RINVELSTK(gl)GQK_
RBM14	Ubiquitylation	K152		0.374	_INVELSTKGQK(gl)_
RBM14	Phosphorylation	T206	-0.112	-0.221	_QPT(ph)PPFFGR_
RBM14	Phosphorylation	S582	0.285	0.247	_TRLS(ph)PPR_
RBM14	Ubiquitylation	K593	-0.617	0.778	_ASYDDPYK(gl)K_
RBM14	Phosphorylation	S618	1.422	0.845	_RLS(ph)ESQLSFR_
SNRPN	Ubiquitylation	K8	0.805		_SSK(gl)MLQHIDYR_
SNRPN	Ubiquitylation	K32		0.987	_IFIGTFK(gl)_
SNRPN	Ubiquitylation	K88	-0.870		_GENLVSMTVEGPPPK(gl)DTGIAR_
SRF	Phosphorylation	S224	-0.512	-0.458	_ALIQTCLNSPDS(ph)PPR_
UQCRFS1	Ubiquitylation	K110		-0.915	_RLEVLDSTK(gl)SSR_
UQCRFS1	Ubiquitylation	K172		-0.698	_LSDIPEGK(gl)NMAFK_