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Query: SNRPN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNRPN 0 4.327 -1.150 1.460 0.279 -0.218 0.342 0.246 0.550
SNRPN 0 4.327 1.390 -0.910 0.279 -0.218 0.342 0.246 0.550

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNRPN Ubiquitylation K32 0.987 _IFIGTFK(gl)_
SNRPN Ubiquitylation K8 0.805 _SSK(gl)MLQHIDYR_
SNRPN Ubiquitylation K88 -0.870 _GENLVSMTVEGPPPK(gl)DTGIAR_

Background Information for SNRPN:


Pubmed-SNRPN »
Uniprot-SNRPN »
Biogrid-SNRPN »
ProteomicsDB-SNRPN »

Tumorportal-SNRPN »
COSMIC-SNRPN »
GenomeRNAi-SNRPN »
Genecards-SNRPN


Protein-protein Interactions for SNRPN
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait SNRPE Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPF Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPN Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNRPN
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ribonucl_LSM IPR001163 0
Category members Ribonucl_LSM_euk/arc IPR006649 0
Category members LSM_dom IPR010920 0
Category members snRNP-assoc_SmB/SmN IPR017131 0


Protein complexes (CORUM database) featuring SNRPN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1745 SMN complex Database 0
Category members Corum 1749 SMN-PolII-RHA complex Database 0


Categories featuring SNRPN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0005681 spliceosomal complex Database 3.88
Category members GO Category GO:0005685 U1 snRNP Database 0.77
Category members GO Category GO:0005686 U2 snRNP Database 0.74
Category members GO Category GO:0019013 viral nucleocapsid Database 0.55
Category members GO Category GO:0030532 small nuclear ribonucleoprotein complex Database 0.15
Category members Disease phenotype ANGELMAN_SYNDROME ANGELMAN SYNDROME Database 0.04
Category members GO Category GO:0009725 response to hormone Database 0.01
Category members Disease phenotype Prader-Willi_syndrome_due_to_imprinting_mutation Prader-Willi syndrome due to imprinting mutation Database 0
Category members Disease phenotype Prader-Willi_syndrome_due_to_maternal_uniparental_disomy_of_chromosome_15 Prader-Willi syndrome due to maternal uniparental disomy of chromosome 15 Database 0
Category members Disease phenotype Prader-Willi_syndrome_due_to_paternal_deletion_of_15q11q13_type_1 Prader-Willi syndrome due to paternal deletion of 15q11q13 type 1 Database 0
Category members Disease phenotype Prader-Willi_syndrome_due_to_paternal_deletion_of_15q11q13_type_2 Prader-Willi syndrome due to paternal deletion of 15q11q13 type 2 Database 0


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