Results for the Category
Ribonucl_LSM
(IPR001163)
RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
W | |||||||
Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
---|---|---|---|---|---|---|---|---|
SNRPD2 | 1 | -1.740 | 2.880 | 0.068 | -0.598 | 0.211 | 0.010 | 0.140 |
LSM8 | 1 | -1.730 | 3.040 | -0.554 | -0.140 | |||
LSM7 | 1 | -2.240 | 3.880 | |||||
LSM3 | 1 | -1.730 | 3.210 | -1.212 | -1.020 | |||
SNRPD3 | 0 | -0.044 | -0.427 | 0.192 | ||||
LSM5 | 0 | -1.270 | 1.430 | -1.385 | ||||
SNRPB | 0 | -0.690 | 0.900 | 0.279 | -0.218 | 0.342 | 0.246 | 0.550 |
SNRPN | 0 | -1.150 | 1.460 | 0.279 | -0.218 | 0.342 | 0.246 | 0.550 |
SNRPN | 0 | 1.390 | -0.910 | 0.279 | -0.218 | 0.342 | 0.246 | 0.550 |
LSM4 | 0 | 0.040 | -0.030 | -0.414 | -0.767 | |||
SNRPF | 0 | -0.086 | -0.877 | -0.179 | -0.438 | 0.348 | ||
SNRPG | 0 | -0.190 | -0.311 | 0.245 | 0.156 | 0.568 | ||
SNRPG | 0 | |||||||
LSM11 | 0 | 1.200 | -1.030 | |||||
SNRPD1 | 0 | -0.780 | 0.750 | 0.034 | -0.359 | 0.355 | -1.109 | -0.252 |
SNRPE | 0 | -1.140 | 2.270 | -0.259 | -0.638 | -0.181 | 0.064 | -0.174 |
Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
---|---|---|---|---|---|
LSM11 | Phosphorylation | S21 | -1.366 | -1.012 | _SAGAGSPARPPS(ph)PR_ |
LSM4 | Ubiquitylation | K52 | -1.562 | _DGDK(gl)FWR_ | |
LSM4 | Ubiquitylation | K67 | -0.211 | 0.950 | _GSTIK(gl)YLR_ |
LSM7 | Ubiquitylation | K17 | -0.496 | _ESILDLSK(gl)YIDK_ | |
LSM7 | Ubiquitylation | K26 | -0.221 | -0.411 | _VK(gl)FQGGR_ |
SNRPB | Ubiquitylation | K8 | 0.805 | _SSK(gl)MLQHIDYR_ | |
SNRPB | Ubiquitylation | K32 | 0.987 | _IFIGTFK(gl)_ | |
SNRPB | Ubiquitylation | K88 | -0.870 | _GENLVSMTVEGPPPK(gl)DTGIAR_ | |
SNRPD1 | Ubiquitylation | K44 | 0.032 | _AVK(gl)MTLK_ | |
SNRPD2 | Phosphorylation | S2 | -0.117 | 0.507 | _(ac)S(ph)LLNKPK_ |
SNRPD2 | Ubiquitylation | K6 | -0.352 | _(ac)SLLNK(gl)PK_ | |
SNRPD2 | Ubiquitylation | K8 | -0.201 | -0.603 | _(ac)SLLNKPK(gl)SEMTPEELQK_ |
SNRPD2 | Phosphorylation | T12 | 0.766 | _SEMT(ph)PEELQKR_ | |
SNRPD2 | Ubiquitylation | K98 | 0.883 | 0.887 | _YISK(gl)MFLR_ |
SNRPD2 | Ubiquitylation | K118 | -0.918 | -0.587 | _NPLIAGK(gl)_ |
SNRPD3 | Ubiquitylation | K78 | 0.797 | _FLILPDMLK(gl)NAPMLK_ | |
SNRPD3 | Ubiquitylation | K84 | -0.440 | 0.082 | _NAPMLK(gl)SMK_ |
SNRPF | Ubiquitylation | K8 | -1.763 | _(ac)SLPLNPK(gl)PFLNGLTGKPVMVK_ | |
SNRPF | Ubiquitylation | K17 | -1.612 | _(ac)SLPLNPKPFLNGLTGK(gl)PVMVK_ | |
SNRPF | Ubiquitylation | K24 | 0.208 | 0.915 | _LK(gl)WGMEYK_ |
SNRPG | Ubiquitylation | K3 | 0.152 | _(ac)SK(gl)AHPPELKK(gl)_ | |
SNRPG | Ubiquitylation | K11 | -0.955 | _AHPPELKK(gl)_ | |
SNRPG | Ubiquitylation | K20 | -0.065 | _LSLK(gl)LNGGR_ | |
SNRPN | Ubiquitylation | K8 | 0.805 | _SSK(gl)MLQHIDYR_ | |
SNRPN | Ubiquitylation | K32 | 0.987 | _IFIGTFK(gl)_ | |
SNRPN | Ubiquitylation | K88 | -0.870 | _GENLVSMTVEGPPPK(gl)DTGIAR_ |
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