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viral nucleocapsid
(GO:0019013)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
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Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
HNRNPC 2 -1.880
HNRNPC 2
HNRNPC 2 0.393 -0.963 -0.202
HNRNPC 2 0.328
SNRNP200 2 -2.430 4.430 0.929 -0.475 -0.147 -0.376 0.060
SNRPA1 1 -1.610 3.360 -0.071 -0.629 0.211 -0.681 -0.320
HNRNPD 1 -0.108
HNRNPD 1 0.043 -0.543 -0.123 0.230 0.323
HNRNPLL 1 0.440 -0.820 -1.272 -1.092 -0.355 -0.334 0.271
HNRNPH3 0 0.110 -0.400 -0.266 -1.027 -0.346
SNRPD3 0 -0.044 -0.427 0.192
HNRNPL 0 -0.170 0.370 -0.430 -0.816 -0.279 -0.040 0.131
HNRNPUL1 0 -0.097 -0.861 0.386 0.194 -0.005
HNRNPR 0 0.270 -0.580
HNRNPR 0 0.270 -0.580 0.026 -0.219 0.012 0.075 0.243
SNRPN 0 -1.150 1.460 0.279 -0.218 0.342 0.246 0.550
SNRPN 0 1.390 -0.910 0.279 -0.218 0.342 0.246 0.550
LARP1B 0 0.590 -0.210 -0.137 -0.273
RBMX 0 -0.670 0.330 0.351 -0.686 0.103 0.490 0.315
RBMX 0 -0.420 0.010 0.351 -0.686 0.103 0.490 0.315
RBMXL2 0 -1.150 1.080 0.351 -0.686 0.103 0.490 0.315
RBMXL3 0 0.590 -1.080 0.351 -0.686 0.103 0.490 0.315

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
HNRNPC Ubiquitylation K8 0.732 1.200 _(ac)ASNVTNK(gl)TDPR_
HNRNPC Ubiquitylation K29 0.547 0.408 _VFIGNLNTLVVK(gl)K_
HNRNPC Ubiquitylation K30 1.835 0.526 _K(gl)SDVEAIFSK_
HNRNPC Ubiquitylation K39 1.567 1.654 _KSDVEAIFSK(gl)YGK_
HNRNPC Ubiquitylation K42 1.682 0.918 _YGK(gl)IVGCSVHK_
HNRNPC Ubiquitylation K89 2.190 _MIAGQVLDINLAAEPK(gl)VNR_
HNRNPC Phosphorylation S115 0.163 -0.604 _SAAEMYGSVTEHPSPS(ph)PLLSSSFDLDYDFQR_
HNRNPC Ubiquitylation K187 2.283 _SGK(gl)LKGDDLQAIK_
HNRNPC Ubiquitylation K189 2.864 2.924 _LK(gl)GDDLQAIKK_
HNRNPC Ubiquitylation K198 1.950 1.082 _K(gl)ELTQIK_
HNRNPC Ubiquitylation K204 1.166 1.091 _ELTQIK(gl)QK_
HNRNPC Ubiquitylation K206 1.658 _QK(gl)VDSLLENLEK_
HNRNPC Phosphorylation S219 1.346 1.180 _NDKS(ph)EEEQSSSSVKK_
HNRNPC Ubiquitylation K223 2.087 1.452 _EQSK(gl)QAVEMK_
HNRNPC Phosphorylation S227 -0.159 -0.194 _SEEEQSSSS(ph)VKKDETNVK_
HNRNPC Ubiquitylation K229 0.976 _QAVEMK(gl)NDKSEEEQSSSSVK_
HNRNPC Ubiquitylation K232 1.213 _QAVEMK(gl)NDKSEEEQSSSSVK_
HNRNPC Phosphorylation S239 0.162 _M(ox)ES(ph)EGGADDSAEEGDLLDDDDNEDR_
HNRNPC Phosphorylation S240 0.895 0.581 _M(ox)ES(ph)EGGADDSAEEGDLLDDDDNEDR_
HNRNPC Ubiquitylation K243 -0.143 _NDKSEEEQSSSSVK(gl)KDETNVK_
HNRNPC Phosphorylation S246 0.479 0.284 _M(ox)ESEGGADDS(ph)AEEGDLLDDDDNEDR_
HNRNPC Phosphorylation S247 0.551 0.433 _MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQVK_
HNRNPC Phosphorylation S253 0.514 _M(ox)ES(ph)EGGADDS(ph)AEEGGLLDDDDNEDRGDDQLELIK_
HNRNPC Phosphorylation S260 0.514 _M(ox)ES(ph)EGGADDS(ph)AEEGGLLDDDDNEDRGDDQLELIK_
HNRNPC Phosphorylation S285 0.568 0.403 _EAEEGEDDRDS(ph)ANGEDDS_
HNRNPD Phosphorylation S71 0.207 0.564 _IDAS(ph)KNEEDEGHSNSSPR_
HNRNPD Ubiquitylation K72 -0.128 _IDASK(gl)NEEDEGHSNSSPR_
HNRNPD Phosphorylation S82 0.468 0.491 _IDASKNEEDEGHSNS(ph)SPR_
HNRNPD Phosphorylation S83 0.540 0.447 _IDASKNEEDEGHSNSS(ph)PR_
HNRNPD Ubiquitylation K111 1.461 _MFIGGLSWDTTKK(gl)_
HNRNPD Ubiquitylation K114 1.183 2.839 _DLK(gl)DYFSK_
HNRNPD Ubiquitylation K129 -0.154 _FGEVVDCTLK(gl)LDPITGR_
HNRNPD Ubiquitylation K165 0.293 _LNGK(gl)VIDPK_
HNRNPD Phosphorylation S190 0.067 0.142 _IFVGGLS(ph)PDTPEEK_
HNRNPD Ubiquitylation K197 0.079 0.081 _IFVGGLSPDTPEEK(gl)IR_
HNRNPD Ubiquitylation K251 0.873 _YHNVGLSK(gl)CEIK_
HNRNPD Ubiquitylation K255 1.330 0.804 _CEIK(gl)VAMSK_
HNRNPD Ubiquitylation K260 0.443 -1.116 _VAMSK(gl)EQYQQQQQWGSR_
HNRNPH3 Ubiquitylation K6 -1.335 _(ac)MDWVMK(gl)HNGPNDASDGTVR_
HNRNPH3 Ubiquitylation K76 -0.322 -0.873 _EIAENALGK(gl)HK_
HNRNPH3 Ubiquitylation K97 -1.118 _SEIK(gl)GFYDPPRR_
HNRNPH3 Phosphorylation S216 -0.039 -0.105 _ATENDIANFFS(ph)PLNPIR_
HNRNPL Ubiquitylation K59 0.308 _YYGGGSEGGRAPK(gl)R_
HNRNPL Ubiquitylation K269 0.860 0.261 _IEYAK(gl)PTR_
HNRNPL Ubiquitylation K302 -0.616 _NDQDTWDYTNPNLSGQGDPGSNPNK(gl)R_
HNRNPL Ubiquitylation K455 -0.114 _LNVCVSK(gl)QPAIMPGQSYGLEDGSCSYK_
HNRNPL Ubiquitylation K493 1.062 0.580 _FSTPEQAAK(gl)NR_
HNRNPL Ubiquitylation K533 1.067 _RPSSVK(gl)VFSGK_
HNRNPL Ubiquitylation K538 -0.280 0.255 _VFSGK(gl)SER_
HNRNPLL Phosphorylation S61 1.660 _SFS(ph)QPEAGGSHHK_
HNRNPR Ubiquitylation K41 -0.503 _TLIEAGLPQK(gl)VAER_
HNRNPR Ubiquitylation K103 0.732 0.774 _SAFLCGVMK(gl)TYR_
HNRNPR Ubiquitylation K126 0.171 _VQESTKGPDEAK(gl)IK_
HNRNPR Ubiquitylation K224 -0.144 _EAAQEAVK(gl)LCDSYEIRPGK_
HNRNPR Ubiquitylation K313 1.171 0.697 _LMSGK(gl)VK_
HNRNPR Ubiquitylation K315 -0.279 1.412 _LMSGKVK(gl)_
HNRNPR Ubiquitylation K366 0.802 1.092 _SFSEFGK(gl)LER_
HNRNPUL1 Ubiquitylation K117 0.073 1.411 _QNQFYDTQVIK(gl)QENESGYER_
HNRNPUL1 Ubiquitylation K146 -1.124 0.295 _TEMK(gl)QGAPTSFLPPEASQLKPDR_
HNRNPUL1 Ubiquitylation K162 -1.476 0.097 _QGAPTSFLPPEASQLK(gl)PDR_
HNRNPUL1 Phosphorylation S194 -0.515 -0.719 _GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK_
HNRNPUL1 Phosphorylation T209 -0.405 -0.576 _GRSPQPPAEEDEDDFDDT(ph)LVAIDTYNCDLHFK_
HNRNPUL1 Ubiquitylation K270 -1.861 _INEEISVK(gl)HLPSTEPDPHVVR_
HNRNPUL1 Ubiquitylation K440 0.256 _TTWAIK(gl)HAASNPSK_
HNRNPUL1 Phosphorylation S718 -1.254 _APQQQPPPQQPPPPQPPPQQPPPPPSYS(ph)PAR_
LARP1B Phosphorylation T68 -1.610 -2.397 _EGT(ph)GQQERES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR_
LARP1B Phosphorylation S75 -0.796 -1.130 _ES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR_
LARP1B Phosphorylation S90 -1.248 -0.999 _PLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR_
LARP1B Phosphorylation S143 -1.757 -1.467 _NALPPVLTTVNGQS(ph)PPEHSAPAK_
LARP1B Ubiquitylation K367 -0.300 _K(gl)FDGVEGPR_
LARP1B Phosphorylation T376 -0.460 _KFDGVEGPRT(ph)PK_
LARP1B Phosphorylation T526 -0.241 -0.073 _AVT(ph)PVPTKTEEVSNLK_
LARP1B Ubiquitylation K531 -0.736 _AVTPVPTK(gl)TEEVSNLK_
LARP1B Phosphorylation S546 0.095 0.074 _GLS(ph)ASLPDLDSENWIEVK_
LARP1B Phosphorylation S548 0.280 0.033 _GLSAS(ph)LPDLDSENWIEVK_
LARP1B Phosphorylation T624 0.657 0.919 _NTFT(ph)AWSDEESDYEIDDRDVNK_
LARP1B Phosphorylation S627 0.601 0.819 _NTFTAWS(ph)DEESDYEIDDRDVNK_
LARP1B Phosphorylation S766 0.705 -0.282 _S(ph)LPTTVPESPNYR_
LARP1B Phosphorylation T770 -0.882 _S(ph)LPTT(ph)VPESPNYR_
LARP1B Phosphorylation S774 -1.292 -0.716 _S(ph)LPTTVPES(ph)PNYR_
LARP1B Phosphorylation T785 -0.957 _TPRT(ph)PRT(ph)PQLK_
LARP1B Phosphorylation T788 -0.523 0.030 _TPRT(ph)PRT(ph)PQLK_
LARP1B Ubiquitylation K792 -1.154 -1.193 _TPQLK(gl)DSSQTSR_
LARP1B Ubiquitylation K805 -1.596 -1.475 _FYPVVK(gl)EGR_
LARP1B Ubiquitylation K813 -1.331 _TLDAK(gl)MPR_
LARP1B Phosphorylation S824 -0.247 -0.306 _HSS(ph)NPPLESHVGWVM(ox)DSR_
LARP1B Phosphorylation T845 -0.191 _T(ph)ASIS(ph)SSPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S847 -1.350 -1.028 _TAS(ph)ISSSPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S849 -0.191 _T(ph)ASIS(ph)SSPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S850 -0.577 _T(ph)ASISS(ph)SPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S853 -0.567 -0.986 _TASIS(ph)SSPS(ph)EGTPTVGSYGCTPQSLPK_
LARP1B Ubiquitylation K1017 -1.527 -0.384 _LQEYLGK(gl)FR_
LARP1B Phosphorylation T1071 -0.846 _PAAMISQPPT(ph)PPTGQPVREDAK_
RBMX Ubiquitylation K22 -0.311 1.156 _LFIGGLNTETNEK(gl)ALEAVFGK_
RBMX Ubiquitylation K30 0.487 1.225 _ALEAVFGK(gl)YGR_
RBMX Phosphorylation S58 0.307 -0.033 _GFAFVTFES(ph)PADAK_
RBMX Ubiquitylation K63 0.299 0.084 _GFAFVTFESPADAK(gl)DAAR_
RBMX Ubiquitylation K80 0.062 _AIK(gl)VEQATKPSFESGR_
RBMX Ubiquitylation K86 0.062 _AIK(gl)VEQATKPSFESGR_
RBMX Phosphorylation S88 0.714 0.720 _VEQATKPS(ph)FESGR_
RBMX Ubiquitylation K150 -0.568 _GPLPVK(gl)R_
RBMX Phosphorylation S208 0.568 0.751 _RDVYLS(ph)PR_
RBMX Ubiquitylation K217 -0.306 0.061 _DDGYSTK(gl)DSYSSR_
RBMX Phosphorylation S249 -0.240 -0.241 _DYGHS(ph)SSRDDYPSR_
RBMX Phosphorylation S250 0.748 _DYGHSS(ph)SRDDYPSR_
RBMX Phosphorylation S280 -0.500 0.128 _DRDYSDHPSGGS(ph)YR_
RBMX Phosphorylation S316 0.753 0.816 _YDDYSSS(ph)RDGYGGSR_
RBMX Phosphorylation S326 0.461 0.344 _DGYGGSRDS(ph)YSSSR_
RBMX Phosphorylation S332 -0.194 -0.215 _DSYSSSRS(ph)DLYSSGR_
RBMX Phosphorylation S352 -0.127 -0.202 _GLPPS(ph)MER_
RBMXL2 Ubiquitylation K22 -0.311 1.156 _LFIGGLNTETNEK(gl)ALEAVFGK_
RBMXL2 Ubiquitylation K30 0.487 1.225 _ALEAVFGK(gl)YGR_
RBMXL2 Phosphorylation S58 0.307 -0.033 _GFAFVTFES(ph)PADAK_
RBMXL2 Ubiquitylation K63 0.299 0.084 _GFAFVTFESPADAK(gl)DAAR_
RBMXL2 Ubiquitylation K80 0.062 _AIK(gl)VEQATKPSFESGR_
RBMXL2 Ubiquitylation K86 0.062 _AIK(gl)VEQATKPSFESGR_
RBMXL2 Phosphorylation S88 0.714 0.720 _VEQATKPS(ph)FESGR_
RBMXL2 Ubiquitylation K150 -0.568 _GPLPVK(gl)R_
RBMXL2 Phosphorylation S208 0.568 0.751 _RDVYLS(ph)PR_
RBMXL2 Ubiquitylation K217 -0.306 0.061 _DDGYSTK(gl)DSYSSR_
RBMXL2 Phosphorylation S249 -0.240 -0.241 _DYGHS(ph)SSRDDYPSR_
RBMXL2 Phosphorylation S250 0.748 _DYGHSS(ph)SRDDYPSR_
RBMXL2 Phosphorylation S280 -0.500 0.128 _DRDYSDHPSGGS(ph)YR_
RBMXL2 Phosphorylation S316 0.753 0.816 _YDDYSSS(ph)RDGYGGSR_
RBMXL2 Phosphorylation S326 0.461 0.344 _DGYGGSRDS(ph)YSSSR_
RBMXL2 Phosphorylation S332 -0.194 -0.215 _DSYSSSRS(ph)DLYSSGR_
RBMXL2 Phosphorylation S352 -0.127 -0.202 _GLPPS(ph)MER_
RBMXL3 Ubiquitylation K22 -0.311 1.156 _LFIGGLNTETNEK(gl)ALEAVFGK_
RBMXL3 Ubiquitylation K30 0.487 1.225 _ALEAVFGK(gl)YGR_
RBMXL3 Phosphorylation S58 0.307 -0.033 _GFAFVTFES(ph)PADAK_
RBMXL3 Ubiquitylation K63 0.299 0.084 _GFAFVTFESPADAK(gl)DAAR_
RBMXL3 Ubiquitylation K80 0.062 _AIK(gl)VEQATKPSFESGR_
RBMXL3 Ubiquitylation K86 0.062 _AIK(gl)VEQATKPSFESGR_
RBMXL3 Phosphorylation S88 0.714 0.720 _VEQATKPS(ph)FESGR_
RBMXL3 Ubiquitylation K150 -0.568 _GPLPVK(gl)R_
RBMXL3 Phosphorylation S208 0.568 0.751 _RDVYLS(ph)PR_
RBMXL3 Ubiquitylation K217 -0.306 0.061 _DDGYSTK(gl)DSYSSR_
RBMXL3 Phosphorylation S249 -0.240 -0.241 _DYGHS(ph)SSRDDYPSR_
RBMXL3 Phosphorylation S250 0.748 _DYGHSS(ph)SRDDYPSR_
RBMXL3 Phosphorylation S280 -0.500 0.128 _DRDYSDHPSGGS(ph)YR_
RBMXL3 Phosphorylation S316 0.753 0.816 _YDDYSSS(ph)RDGYGGSR_
RBMXL3 Phosphorylation S326 0.461 0.344 _DGYGGSRDS(ph)YSSSR_
RBMXL3 Phosphorylation S332 -0.194 -0.215 _DSYSSSRS(ph)DLYSSGR_
RBMXL3 Phosphorylation S352 -0.127 -0.202 _GLPPS(ph)MER_
SNRNP200 Phosphorylation S225 0.540 0.498 _EEAS(ph)DDDMEGDEAVVR_
SNRNP200 Ubiquitylation K284 -0.370 1.144 _FYDDAIVSQK(gl)K_
SNRNP200 Ubiquitylation K479 0.256 1.664 _YAQAGFEGFK(gl)TLNR_
SNRNP200 Ubiquitylation K487 1.596 _IQSK(gl)LYR_
SNRNP200 Ubiquitylation K557 1.715 _SLVQEMVGSFGK(gl)R_
SNRNP200 Ubiquitylation K770 0.795 _TEAEQCK(gl)NLELK_
SNRNP200 Ubiquitylation K1544 -0.229 -0.207 _LLSMAK(gl)PVYHAITK_
SNRNP200 Ubiquitylation K2080 0.670 0.568 _SNSLISIK(gl)R_
SNRNP200 Ubiquitylation K2087 0.252 _LTLQQK(gl)AK_
SNRNP200 Ubiquitylation K2089 1.167 0.252 _LTLQQKAK(gl)_
SNRPA1 Ubiquitylation K67 -1.041 _LK(gl)TLLVNNNR_
SNRPA1 Ubiquitylation K149 -0.174 -1.201 _VLDFQK(gl)VK_
SNRPA1 Ubiquitylation K160 0.416 _QEAEK(gl)MFK_
SNRPA1 Ubiquitylation K172 0.514 0.038 _GAQLAK(gl)DIAR_
SNRPA1 Ubiquitylation K179 -0.103 _SK(gl)TFNPGAGLPTDKK_
SNRPA1 Phosphorylation T180 -0.576 _SKT(ph)FNPGAGLPTDKK_
SNRPA1 Ubiquitylation K191 -0.454 _TFNPGAGLPTDK(gl)K_
SNRPA1 Ubiquitylation K192 -0.058 _TFNPGAGLPTDKK(gl)_
SNRPA1 Phosphorylation S197 -0.078 _GGPS(ph)PGDVEAIK_
SNRPA1 Ubiquitylation K221 0.206 0.311 _LK(gl)GLLQSGQIPGR_
SNRPD3 Ubiquitylation K78 0.797 _FLILPDMLK(gl)NAPMLK_
SNRPD3 Ubiquitylation K84 -0.440 0.082 _NAPMLK(gl)SMK_
SNRPN Ubiquitylation K8 0.805 _SSK(gl)MLQHIDYR_
SNRPN Ubiquitylation K32 0.987 _IFIGTFK(gl)_
SNRPN Ubiquitylation K88 -0.870 _GENLVSMTVEGPPPK(gl)DTGIAR_


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