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Query: LARP1B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LARP1B 0 0.531 0.590 -0.210 -0.137 -0.273

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LARP1B Phosphorylation T624 0.657 0.919 _NTFT(ph)AWSDEESDYEIDDRDVNK_
LARP1B Phosphorylation S627 0.601 0.819 _NTFTAWS(ph)DEESDYEIDDRDVNK_
LARP1B Phosphorylation S546 0.095 0.074 _GLS(ph)ASLPDLDSENWIEVK_
LARP1B Phosphorylation S548 0.280 0.033 _GLSAS(ph)LPDLDSENWIEVK_
LARP1B Phosphorylation T788 -0.523 0.030 _TPRT(ph)PRT(ph)PQLK_
LARP1B Phosphorylation T526 -0.241 -0.073 _AVT(ph)PVPTKTEEVSNLK_
LARP1B Phosphorylation S766 0.705 -0.282 _S(ph)LPTTVPESPNYR_
LARP1B Phosphorylation S824 -0.247 -0.306 _HSS(ph)NPPLESHVGWVM(ox)DSR_
LARP1B Ubiquitylation K1017 -1.527 -0.384 _LQEYLGK(gl)FR_
LARP1B Phosphorylation T376 -0.460 _KFDGVEGPRT(ph)PK_
LARP1B Phosphorylation S774 -1.292 -0.716 _S(ph)LPTTVPES(ph)PNYR_
LARP1B Phosphorylation T1071 -0.846 _PAAMISQPPT(ph)PPTGQPVREDAK_
LARP1B Phosphorylation T785 -0.957 _TPRT(ph)PRT(ph)PQLK_
LARP1B Phosphorylation S853 -0.567 -0.986 _TASIS(ph)SSPS(ph)EGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S90 -1.248 -0.999 _PLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR_
LARP1B Phosphorylation S847 -1.350 -1.028 _TAS(ph)ISSSPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S75 -0.796 -1.130 _ES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR_
LARP1B Ubiquitylation K792 -1.154 -1.193 _TPQLK(gl)DSSQTSR_
LARP1B Phosphorylation S143 -1.757 -1.467 _NALPPVLTTVNGQS(ph)PPEHSAPAK_
LARP1B Ubiquitylation K805 -1.596 -1.475 _FYPVVK(gl)EGR_
LARP1B Phosphorylation T68 -1.610 -2.397 _EGT(ph)GQQERES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR_
LARP1B Ubiquitylation K367 -0.300 _K(gl)FDGVEGPR_
LARP1B Ubiquitylation K531 -0.736 _AVTPVPTK(gl)TEEVSNLK_
LARP1B Phosphorylation T770 -0.882 _S(ph)LPTT(ph)VPESPNYR_
LARP1B Ubiquitylation K813 -1.331 _TLDAK(gl)MPR_
LARP1B Phosphorylation T845 -0.191 _T(ph)ASIS(ph)SSPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S849 -0.191 _T(ph)ASIS(ph)SSPSEGTPTVGSYGCTPQSLPK_
LARP1B Phosphorylation S850 -0.577 _T(ph)ASISS(ph)SPSEGTPTVGSYGCTPQSLPK_

Background Information for LARP1B:


Pubmed-LARP1B »
Uniprot-LARP1B »
Biogrid-LARP1B »
ProteomicsDB-LARP1B »

Tumorportal-LARP1B »
COSMIC-LARP1B »
GenomeRNAi-LARP1B »
Genecards-LARP1B


Protein-protein Interactions for LARP1B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait APOBEC3D Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCNI2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDX1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DGCR8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ELAVL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GSPT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait H2AFX Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LARP1B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MKI67IP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP70 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRA2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WDR46 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZC3H3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LARP1B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members DM15 IPR006607 0
Category members Lupus_La_RNA-bd IPR006630 0


Protein complexes (CORUM database) featuring LARP1B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LARP1B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0019013 viral nucleocapsid Database 0.55


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