bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: HNRNPUL1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HNRNPUL1 0 0.779 -0.097 -0.861 0.386 0.194 -0.005

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
HNRNPUL1 Ubiquitylation K117 0.073 1.411 _QNQFYDTQVIK(gl)QENESGYER_
HNRNPUL1 Ubiquitylation K146 -1.124 0.295 _TEMK(gl)QGAPTSFLPPEASQLKPDR_
HNRNPUL1 Ubiquitylation K162 -1.476 0.097 _QGAPTSFLPPEASQLK(gl)PDR_
HNRNPUL1 Phosphorylation T209 -0.405 -0.576 _GRSPQPPAEEDEDDFDDT(ph)LVAIDTYNCDLHFK_
HNRNPUL1 Phosphorylation S194 -0.515 -0.719 _GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK_
HNRNPUL1 Phosphorylation S718 -1.254 _APQQQPPPQQPPPPQPPPQQPPPPPSYS(ph)PAR_
HNRNPUL1 Ubiquitylation K270 -1.861 _INEEISVK(gl)HLPSTEPDPHVVR_
HNRNPUL1 Ubiquitylation K440 0.256 _TTWAIK(gl)HAASNPSK_

Background Information for HNRNPUL1:





Protein-protein Interactions for HNRNPUL1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DGCR8 Cat. description Hein, Mann, Cell 2015
Category members IP bait FUS Cat. description Hein, Mann, Cell 2015
Category members IP bait MATR3 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCIF1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNCRIP Cat. description Hein, Mann, Cell 2015
Category members IP bait TAF15 Cat. description Hein, Mann, Cell 2015


Protein Domains in HNRNPUL1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members SAP_dom IPR003034 1.96
Category members B30.2/SPRY IPR001870 0
Category members SPRY_dom IPR003877 0
Category members ConA-like_lec_gl_sf IPR008985 0


Protein complexes (CORUM database) featuring HNRNPUL1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1332 Large Drosha complex Database 0.08


Categories featuring HNRNPUL1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members Pathway Pathway_373 REACTOME_MRNA_PROCESSING 0 12.92
Category members Pathway Pathway_380 REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA 0 12.24
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0000398 mRNA splicing, via spliceosome Database 7.06
Category members Pathway Pathway_377 REACTOME_MRNA_SPLICING 0 6.99
Category members GO Category GO:0019899 enzyme binding Database 1.57
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0019013 viral nucleocapsid Database 0.55
Category members GO Category GO:0006396 RNA processing Database 0.17
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0009615 response to virus Database 0


© Copyright Svejstrup Laboratory 2015