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Query: MSI1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MSI1 1 5.837 -0.810 1.480 -1.024 0.767 3.478
MSI1 1 5.837 -0.810 1.480 -0.604 -0.503 -0.428 0.190 0.347

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
MSI1 Phosphorylation S191 0.551 0.401 _EVMS(ph)PTGSAR_
MSI1 Ubiquitylation K59 -0.142 -0.094 _ECMVMRDPTTK(gl)R_
MSI1 Ubiquitylation K58 -0.580 -0.378 _ECLVMRDPLTK(gl)R_
MSI1 Ubiquitylation K145 -0.244 -0.474 _VEDAMLMFDK(gl)TTNR_
MSI1 Phosphorylation S12 -0.840 -0.920 _(ac)M(ox)ETDAPQPGLAS(ph)PDSPHDPCK_
MSI1 Phosphorylation S15 -0.989 -1.151 _(ac)M(ox)ETDAPQPGLASPDS(ph)PHDPCK_

Background Information for MSI1:


Pubmed-MSI1 »
Uniprot-MSI1 »
Biogrid-MSI1 »
ProteomicsDB-MSI1 »

Tumorportal-MSI1 »
COSMIC-MSI1 »
GenomeRNAi-MSI1 »
Genecards-MSI1


Protein-protein Interactions for MSI1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait LOXL3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in MSI1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34


Protein complexes (CORUM database) featuring MSI1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring MSI1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0030855 epithelial cell differentiation Database 0.28
Category members GO Category GO:0005844 polysome Database 0.09
Category members GO Category GO:0009725 response to hormone Database 0.01
Category members GO Category GO:0003727 single-stranded RNA binding Database 0
Category members GO Category GO:0007399 nervous system development Database 0
Category members GO Category GO:0008266 poly(U) RNA binding Database 0


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