RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PI4KB	2	-1.640	3.640	2.483
LDLRAP1	2	0.870	-0.890
DNM2	1	0.440	-0.080		1.049	-1.435	1.593	1.013
DNM2	1	0.440	-0.080	0.076
DNM1	1	-0.280	0.150		1.049	-1.435	1.593	1.013
PLD2	1	-0.390	-0.250
IGF2R	1	2.250	-1.150				-0.107	0.125
M6PR	0	-0.030	-0.320
M6PR	0	-0.030	-0.320				0.170	-0.605
CLTCL1	0	-1.030	1.030
CLTCL1	0	-1.030	1.030	-0.538	-0.243	-0.478	0.375	0.284
PICALM	0	0.890	-0.980				0.221	0.666
PICALM	0	0.890	-0.980
APOB	0	0.130	0.050				-4.359	0.702
MICALL1	0	1.820	-1.320				0.010	-0.796
SNX17	0	0.540	-0.070
LRP1	0	-0.360	0.400				1.199	1.016
LDLR	0	0.610	-0.680					-0.328
SNX9	0			0.301	1.109	0.556	0.141	0.127
HIP1R	0	-0.280	1.350					0.541
CAP1	0	-0.450	1.100				0.499	-0.364
PPT1	0	1.320	-0.730
REPS1	0	-0.680	1.120	0.365				0.080
CLTC	0	0.350	-0.220	-0.538	-0.243	-0.478	0.375	0.284
DAB2	0	0.510	-0.470
REPS2	0	0.150	-0.060	0.365				0.080
PDLIM7	0	0.490	-0.430	-0.704			-0.559	-0.337

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CAP1	Phosphorylation	T307	-1.904	-1.464	_SGPKPFSAPKPQT(ph)SPSPK_
CAP1	Phosphorylation	S308	-1.510	-1.436	_SGPKPFSAPKPQTS(ph)PSPK_
CAP1	Ubiquitylation	K398	0.063		_DVK(gl)VQVMGK_
CLTC	Ubiquitylation	K83	0.714		_VIALK(gl)AGK_
CLTC	Ubiquitylation	K86		0.631	_VIALKAGK(gl)_
CLTC	Ubiquitylation	K389	-1.051	-0.085	_VAANAPK(gl)GILR_
CLTC	Phosphorylation	T394	-0.123	0.181	_GILRT(ph)PDTIRR_
CLTC	Ubiquitylation	K506		0.267	_IVLYAK(gl)K_
CLTC	Ubiquitylation	K507	0.050	0.267	_IVLYAKK(gl)_
CLTC	Ubiquitylation	K619	-0.177	0.475	_AHIAQLCEK(gl)AGLLQR_
CLTC	Ubiquitylation	K737	-0.435	-0.298	_YIQAACK(gl)TGQIK_
CLTC	Ubiquitylation	K742	0.005	0.082	_TGQIK(gl)EVER_
CLTC	Ubiquitylation	K851		-0.859	_GQFSTDELVAEVEK(gl)R_
CLTC	Ubiquitylation	K911	-1.282		_YCEK(gl)RDPHLACVAYER_
CLTC	Ubiquitylation	K1118	-0.674	-0.765	_AQLQK(gl)GMVK_
CLTC	Ubiquitylation	K1209		-0.791	_CYDEK(gl)MYDAAK_
CLTC	Ubiquitylation	K1443	-2.089	-0.019	_VK(gl)QLPLVKPYLR_
CLTC	Ubiquitylation	K1449		-2.307	_QLPLVK(gl)PYLR_
CLTC	Ubiquitylation	K1516		-0.990	_IAAYLFK(gl)GNNR_
CLTC	Ubiquitylation	K1609	-0.714		_EYLTK(gl)VDKLDASESLR_
CLTCL1	Ubiquitylation	K83	0.714		_VIALK(gl)AGK_
CLTCL1	Ubiquitylation	K86		0.631	_VIALKAGK(gl)_
CLTCL1	Ubiquitylation	K389	-1.051	-0.085	_VAANAPK(gl)GILR_
CLTCL1	Phosphorylation	T394	-0.123	0.181	_GILRT(ph)PDTIRR_
CLTCL1	Ubiquitylation	K506		0.267	_IVLYAK(gl)K_
CLTCL1	Ubiquitylation	K507	0.050	0.267	_IVLYAKK(gl)_
CLTCL1	Ubiquitylation	K619	-0.177	0.475	_AHIAQLCEK(gl)AGLLQR_
CLTCL1	Ubiquitylation	K737	-0.435	-0.298	_YIQAACK(gl)TGQIK_
CLTCL1	Ubiquitylation	K742	0.005	0.082	_TGQIK(gl)EVER_
CLTCL1	Ubiquitylation	K851		-0.859	_GQFSTDELVAEVEK(gl)R_
CLTCL1	Ubiquitylation	K911	-1.282		_YCEK(gl)RDPHLACVAYER_
CLTCL1	Ubiquitylation	K941		-1.252	_VCNENSLFK(gl)SEAR_
CLTCL1	Ubiquitylation	K1118	-0.674	-0.765	_AQLQK(gl)GMVK_
CLTCL1	Ubiquitylation	K1209		-0.791	_CYDEK(gl)MYDAAK_
CLTCL1	Ubiquitylation	K1443	-2.089	-0.019	_VK(gl)QLPLVKPYLR_
CLTCL1	Ubiquitylation	K1449		-1.977	_AGQLPLVK(gl)PYLR_
CLTCL1	Ubiquitylation	K1449		-2.307	_QLPLVK(gl)PYLR_
CLTCL1	Ubiquitylation	K1516		-0.990	_IAAYLFK(gl)GNNR_
CLTCL1	Ubiquitylation	K1609	-0.714		_EYLTK(gl)VDKLDASESLR_
DAB2	Phosphorylation	S401	-0.704	-0.722	_SSPNPFVGS(ph)PPK_
DNM1	Ubiquitylation	K393	0.542		_EISYAIK(gl)NIHGVR_
DNM1	Phosphorylation	S764	-2.106	-1.205	_EALNIIGDISTSTVSTPVPPPVDDTWLQSASSHS(ph)PTPQR_
DNM2	Ubiquitylation	K393	0.542		_EISYAIK(gl)NIHGVR_
DNM2	Phosphorylation	S764	-2.106	-1.205	_EALNIIGDISTSTVSTPVPPPVDDTWLQSASSHS(ph)PTPQR_
HIP1R	Ubiquitylation	K5	-0.561	-0.282	_(ac)MNSIK(gl)NVPAR_
IGF2R	Ubiquitylation	K2352	-0.372	0.420	_SSNVSYK(gl)YSK_
IGF2R	Ubiquitylation	K2394	-0.020	0.221	_EGQENGHITTK(gl)SVK_
IGF2R	Phosphorylation	S2409	0.107	0.119	_ALSSLHGDDQDS(ph)EDEVLTIPEVK_
LDLRAP1	Ubiquitylation	K5	6.085	8.895	_(ac)MDALK(gl)SAGR_
LDLRAP1	Phosphorylation	S14	-0.662	0.149	_ALIRS(ph)PSLAK_
LRP1	Ubiquitylation	K4527	-0.315		_HSLASTDEK(gl)R_
M6PR	Phosphorylation	S267	-0.203	0.348	_GVGDDQLGEES(ph)EERDDHLLPM_
MICALL1	Phosphorylation	S273		-0.960	_AS(ph)PEARPQIPTKPR_
MICALL1	Phosphorylation	S295	-0.855	-0.714	_LQELAS(ph)PPAGRPTPAPR_
MICALL1	Phosphorylation	S391	-1.476	-2.088	_KKPAPLPPSSS(ph)PGPPSQDSR_
MICALL1	Phosphorylation	S486	-0.513	-0.540	_APSAS(ph)PLALHASR_
MICALL1	Phosphorylation	S578	-0.453	-0.351	_VEQM(ox)PQAS(ph)PGLAPR_
MICALL1	Phosphorylation	S619		-0.921	_SPVPSPGS(ph)SSPQLQVK_
MICALL1	Phosphorylation	S620		-0.870	_SPVPSPGSS(ph)SPQLQVK_
MICALL1	Phosphorylation	S621	-0.800	-0.798	_SPVPSPGSSS(ph)PQLQVK_
PDLIM7	Phosphorylation	S111	-0.573		_YTFAPSVS(ph)LNK_
PI4KB	Phosphorylation	S266	-1.800	-1.618	_ELPSLSPAPDTGLS(ph)PSK_
PI4KB	Phosphorylation	S268		-1.249	_RELPSLSPAPDTGLS(ph)PSK_
PI4KB	Phosphorylation	S428	0.388	0.410	_S(ph)VENLPECGITHEQR_
PI4KB	Phosphorylation	S511	1.008	0.749	_RLS(ph)EQLAHTPTAFK_
PICALM	Ubiquitylation	K210	-0.364	0.811	_YLNEK(gl)AVSYR_
PICALM	Phosphorylation	T294		-0.800	_KPHTSLT(ph)TAASPVSTSAGGIM(ox)TAPAIDIFSTPSSSNSTSK_
PLD2	Ubiquitylation	K80		2.298	_YTSGSK(gl)VGTCTLYSVR_
PPT1	Ubiquitylation	K174		-0.445	_TLNAGAYSK(gl)VVQER_
PPT1	Ubiquitylation	K224		1.077	_NLMALKK(gl)_
PPT1	Ubiquitylation	K253		0.222	_SGQAK(gl)ETIPLQETSLYTQDR_
REPS1	Ubiquitylation	K105		-0.474	_FVASK(gl)NEQESR_
REPS1	Phosphorylation	S143		0.112	_KGS(ph)VSHDTVQPR_
REPS1	Phosphorylation	S392	-0.669	-0.684	_LIDLEDSADVGDQPGEVGYSGS(ph)PAEAPPSK_
REPS1	Phosphorylation	T481	-0.533	-0.095	_TGSDHTNPT(ph)SPLLVKPSDLLEENK_
REPS1	Phosphorylation	S482	-0.386	-0.314	_TGSDHTNPTS(ph)PLLVKPSDLLEENK_
REPS1	Phosphorylation	S562	1.011	0.609	_SSS(ph)LDMNR_
REPS1	Ubiquitylation	K708	0.167	0.890	_LK(gl)SEDELR_
REPS1	Phosphorylation	S709	0.308	0.403	_LKS(ph)EDELRPEVDEHTQK_
REPS2	Ubiquitylation	K105		-0.474	_FVASK(gl)NEQESR_
REPS2	Phosphorylation	S143		0.112	_KGS(ph)VSHDTVQPR_
REPS2	Phosphorylation	S392	-0.669	-0.684	_LIDLEDSADVGDQPGEVGYSGS(ph)PAEAPPSK_
REPS2	Phosphorylation	T481	-0.533	-0.095	_TGSDHTNPT(ph)SPLLVKPSDLLEENK_
REPS2	Phosphorylation	S482	-0.386	-0.314	_TGSDHTNPTS(ph)PLLVKPSDLLEENK_
REPS2	Phosphorylation	S562	1.011	0.609	_SSS(ph)LDMNR_
REPS2	Ubiquitylation	K708	0.167	0.890	_LK(gl)SEDELR_
REPS2	Phosphorylation	S709	0.308	0.403	_LKS(ph)EDELRPEVDEHTQK_
SNX17	Phosphorylation	S333		-0.381	_VTSSVPLPSGS(ph)TSSPGR_
SNX9	Ubiquitylation	K179		0.445	_SSSYFK(gl)DSESADAGGAQR_
SNX9	Phosphorylation	S198		0.523	_ASS(ph)SSMKIPLNK_