bioLOGIC-db

bioLOGIC Data

Query: PDLIM7

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
PDLIM7	0	-2.173	0.490	-0.430	-0.704			-0.559	-0.337

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
PDLIM7	Phosphorylation	S111	-0.573		_YTFAPSVS(ph)LNK_

ProteomicsDB-PDLIM7 »

Protein-protein Interactions for PDLIM7

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait MYH9	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MYO1C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PDLIM7	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait ETV7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FHL5	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait IKZF5	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LPXN	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NFATC2IP	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PDLIM7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PRICKLE3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RGS3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPGR	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SYT11	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait THRB	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZCCHC7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZNF576	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in PDLIM7

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	PDZ	IPR001478	0.15
Category members	Znf_LIM	IPR001781	0

Protein complexes (CORUM database) featuring PDLIM7

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring PDLIM7

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005737	cytoplasm	Database	12.81
Category members	GO Category	GO:0015629	actin cytoskeleton	Database	2.22
Category members	GO Category	GO:0030036	actin cytoskeleton organization	Database	1.08
Category members	GO Category	GO:0005925	focal adhesion	Database	0.68
Category members	GO Category	GO:0001726	ruffle	Database	0.33
Category members	GO Category	GO:0007275	multicellular organismal development	Database	0.31
Category members	GO Category	GO:0008270	zinc ion binding	Database	0.29
Category members	GO Category	GO:0030154	cell differentiation	Database	0.06
Category members	GO Category	GO:0001725	stress fiber	Database	0.04
Category members	Pathway	Pathway_643	PID_RET_PATHWAY	0	0
Category members	GO Category	GO:0001503	ossification	Database	0
Category members	GO Category	GO:0006898	receptor-mediated endocytosis	Database	0
Category members	GO Category	GO:0030054	cell junction	Database	0
Category members	GO Category	GO:0045669	positive regulation of osteoblast differentiation	Database	0