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Query: SNX17

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNX17 0 -0.381 0.540 -0.070

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNX17 Phosphorylation S333 -0.381 _VTSSVPLPSGS(ph)TSSPGR_

Background Information for SNX17:


Pubmed-SNX17 »
Uniprot-SNX17 »
Biogrid-SNX17 »
ProteomicsDB-SNX17 »

Tumorportal-SNX17 »
COSMIC-SNX17 »
GenomeRNAi-SNX17 »
Genecards-SNX17


Protein-protein Interactions for SNX17
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C1orf186 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DAB2IP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DKFZp686O24166 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FRMD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GMPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPRC5C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HAVCR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL20RA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MANSC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRAP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MTM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NPDC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC1A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TPCN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VIPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNX17
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Phox IPR001683 0.24
Category members Ras-assoc IPR000159 0
Category members FERM_central IPR019748 0


Protein complexes (CORUM database) featuring SNX17
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SNX17
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0008022 protein C-terminus binding Database 1.43
Category members GO Category GO:0005769 early endosome Database 1.26
Category members GO Category GO:0035091 phosphatidylinositol binding Database 0.62
Category members GO Category GO:0030659 cytoplasmic vesicle membrane Database 0.62
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0016197 endosomal transport Database 0.43
Category members GO Category GO:0005768 endosome Database 0.29
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0016023 cytoplasmic membrane-bounded vesicle Database 0.17
Category members GO Category GO:0050750 low-density lipoprotein particle receptor binding Database 0.04
Category members GO Category GO:0005102 receptor binding Database 0
Category members GO Category GO:0006707 cholesterol catabolic process Database 0
Category members GO Category GO:0006898 receptor-mediated endocytosis Database 0
Category members GO Category GO:0007154 cell communication Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0030100 regulation of endocytosis Database 0


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