RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
FREM2	2	2.330	-0.650
PLD2	1	-0.390	-0.250
NISCH	0	0.060	0.270				-0.247	0.240
SNX1	0	-0.090	-0.590
SNX29	0	1.500	-1.180
SNX24	0	0.060	0.060
INPP5A	0	1.730	-0.790
PLD1	0	-0.150	-0.140
KIF16B	0	0.020	0.820
JAG1	0	-0.260	0.070
OIP5	0	0.280	0.160
SNX8	0	0.370	-0.460
SH3PXD2A	0	1.170	-0.770
SNX3	0	0.210	-0.270
SNX4	0	-0.190	0.740
SNX17	0	0.540	-0.070
HS1BP3	0	0.300	-0.270
SNX19	0	0.820	-0.060
TRIP10	0	0.140	-0.170
SNX6	0	0.090	-0.550
SNX9	0			0.301	1.109	0.556	0.141	0.127
ARHGAP32	0	0.480	-0.120
SNX14	0	0.610	-0.670
SNX12	0	-0.600	0.290
GJA1	0	-0.410	0.430
ADGRV1	0	-1.630	2.470
SH3PXD2B	0	0.340	-0.580
SNX18	0	1.820	-0.780				-2.601
JAG2	0	-0.170	0.020
NF1	0	1.000	-0.500				0.444	-0.190
SNX2	0	-0.850	-0.050				-0.347	0.878

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADGRV1	Ubiquitylation	K548		0.402	_LGGTK(gl)GDVR_
ADGRV1	Ubiquitylation	K589		-1.152	_RNDLIFPEQK(gl)TQVTTK_
ADGRV1	Ubiquitylation	K756		0.252	_VNVENQVLK(gl)SGYTSR_
ADGRV1	Ubiquitylation	K1453		-0.536	_SLK(gl)GEAITDGPGILR_
ARHGAP32	Phosphorylation	S703		0.067	_S(ph)AKSEESLTSLHAVDGDSK_
ARHGAP32	Phosphorylation	S706	0.359	0.358	_SAKS(ph)EESLTSLHAVDGDSK_
ARHGAP32	Phosphorylation	S871	0.466	0.562	_LSPFFTLDLS(ph)PTEDK_
FREM2	Ubiquitylation	K299		2.113	_GAPVGSPALK(gl)R_
GJA1	Ubiquitylation	K109	0.099		_LNKK(gl)EEELK_
GJA1	Ubiquitylation	K128	0.209	1.057	_VAQTDGVNVDMHLK(gl)QIEIK_
GJA1	Ubiquitylation	K136	-0.888		_FK(gl)YGIEEHGK_
GJA1	Ubiquitylation	K243	0.152	0.237	_GK(gl)SDPYHATSGALSPAK_
GJA1	Ubiquitylation	K258	-0.280	0.063	_SDPYHATSGALSPAK(gl)DCGSQK_
GJA1	Ubiquitylation	K303	-0.106	0.280	_NYNK(gl)QASEQNWANYSAEQNR_
GJA1	Ubiquitylation	K345		-0.464	_MGQAGSTISNSHAQPFDFPDDNQNSK(gl)K_
GJA1	Ubiquitylation	K346	-1.004	-0.300	_MGQAGSTISNSHAQPFDFPDDNQNSKK(gl)_
GJA1	Phosphorylation	S364		-0.300	_LAAGHELQPLAIVDQRPS(ph)SR_
GJA1	Phosphorylation	S365		-0.300	_LAAGHELQPLAIVDQRPS(ph)SR_
GJA1	Phosphorylation	S372	0.940	1.430	_AS(ph)SRPRPDDLEI_
GJA1	Phosphorylation	S373	0.664	0.467	_ASS(ph)RPRPDDLEI_
HS1BP3	Phosphorylation	S194	0.170	0.214	_GEDAEES(ph)LEEEEALDPLGIMR_
INPP5A	Ubiquitylation	K82	0.935		_ELLSSDAMK(gl)EYNR_
JAG1	Ubiquitylation	K1142	-0.783		_HGANTVPIKDYENK(gl)_
JAG2	Ubiquitylation	K76		1.283	_VCLK(gl)EYQAK_
JAG2	Phosphorylation	T1155	-0.335	-0.737	_NFT(ph)PPPR_
JAG2	Ubiquitylation	K1200	0.117		_FLSHK(gl)FTK_
KIF16B	Ubiquitylation	K1181	-1.255		_SLGANPDDLK(gl)DPIK_
NF1	Ubiquitylation	K471		0.218	_MAPSLTFKEK(gl)_
NF1	Phosphorylation	S864		-0.458	_SNSGLATYS(ph)PPMGPVSER_
NF1	Phosphorylation	T2514		0.076	_GSEGYLAATYPTVGQT(ph)SPR_
NF1	Phosphorylation	S2515	0.071	0.316	_GSEGYLAATYPTVGQTS(ph)PR_
NF1	Phosphorylation	S2543	0.698	0.655	_S(ph)FDHLISDTK_
NISCH	Ubiquitylation	K942		0.996	_NSFK(gl)LSR_
NISCH	Ubiquitylation	K1009	0.484		_ASLQDLK(gl)TVVIAK_
NISCH	Phosphorylation	S1284	-0.365	-0.534	_TPS(ph)PEPVDKDFYSEFGNK_
NISCH	Ubiquitylation	K1303	0.675	0.227	_TTGK(gl)MENYELIHSSR_
OIP5	Phosphorylation	S47	-1.172		_GS(ph)SPLGPAGLGAEEPAAGPQLPSWLQPER_
OIP5	Phosphorylation	S48	-1.172		_GS(ph)SPLGPAGLGAEEPAAGPQLPSWLQPER_
PLD1	Ubiquitylation	K501		-0.155	_LTDVGSVK(gl)R_
PLD1	Ubiquitylation	K547	0.453	1.120	_SIDDVDSK(gl)LK_
PLD1	Ubiquitylation	K549		1.120	_SIDDVDSK(gl)LK_
PLD1	Ubiquitylation	K1000	-0.600		_NATIYDK(gl)VFR_
PLD2	Ubiquitylation	K80		2.298	_YTSGSK(gl)VGTCTLYSVR_
SH3PXD2A	Ubiquitylation	K282	0.122		_YVTVQPYTSQSK(gl)DEIGFEK_
SH3PXD2A	Phosphorylation	S421	0.568	0.137	_AQISS(ph)PNLR_
SH3PXD2A	Phosphorylation	S515		0.383	_RTS(ph)TLTRPK_
SH3PXD2B	Phosphorylation	S770		-3.158	_KTSS(ph)SSRPLPEVR_
SNX1	Ubiquitylation	K179	1.013	0.331	_SK(gl)QFAVK_
SNX1	Ubiquitylation	K223	-0.206		_SLIGMTKVK(gl)_
SNX12	Ubiquitylation	K61	-0.354	0.545	_TNLPIFK(gl)LK_
SNX12	Ubiquitylation	K63	-0.420		_TNLPIFKLK(gl)_
SNX14	Ubiquitylation	K11		0.472	_TMGQK(gl)LK_
SNX14	Ubiquitylation	K338	-0.059	-0.450	_LELK(gl)QIR_
SNX14	Ubiquitylation	K432		-0.660	_IAEGPYIDVVK(gl)LQTMR_
SNX14	Ubiquitylation	K656		-0.514	_NYEFLKSK(gl)_
SNX14	Ubiquitylation	K763		-0.642	_LFNDLFK(gl)NNANR_
SNX14	Ubiquitylation	K896		-0.381	_CIGEETK(gl)YESIR_
SNX17	Phosphorylation	S333		-0.381	_VTSSVPLPSGS(ph)TSSPGR_
SNX18	Ubiquitylation	K466		-0.225	_EYQK(gl)VGQSFR_
SNX19	Phosphorylation	S699	0.364	-0.194	_SEPQS(ph)PTEELSEAETESKPQTEGK_
SNX19	Ubiquitylation	K903		-0.094	_TQEQK(gl)LAAEK_
SNX2	Ubiquitylation	K116	0.089	0.156	_IESK(gl)SMSAPVIFDR_
SNX2	Phosphorylation	S119		0.336	_SMS(ph)APVIFDR_
SNX2	Ubiquitylation	K181	0.631	1.039	_SEFSVK(gl)R_
SNX2	Ubiquitylation	K218		-0.014	_SIVGMTK(gl)VK_
SNX2	Ubiquitylation	K220	-0.305		_VK(gl)VGKEDSSSTEFVEK_
SNX2	Ubiquitylation	K294	-0.176		_AADAVNK(gl)MTIK_
SNX24	Phosphorylation	S113		0.900	_AES(ph)CGSFDETESEESSK_
SNX24	Phosphorylation	S116	0.723	0.406	_AESCGS(ph)FDETESEESSK_
SNX29	Phosphorylation	S268		0.654	_VTNIIS(ph)FDDEEDEQNSGDVFK_
SNX3	Ubiquitylation	K61	-0.354	0.545	_TNLPIFK(gl)LK_
SNX3	Ubiquitylation	K63	-0.420		_TNLPIFKLK(gl)_
SNX3	Ubiquitylation	K86	-0.772		_ESK(gl)VVVPPLPGK_
SNX3	Ubiquitylation	K95		-2.631	_VVVPPLPGK(gl)AFLR_
SNX3	Ubiquitylation	K158		0.876	_SYTPSK(gl)IR_
SNX4	Ubiquitylation	K199		-0.191	_ETVNETGFQLK(gl)ADSR_
SNX4	Ubiquitylation	K205		-0.587	_LK(gl)ALNATFR_
SNX4	Ubiquitylation	K356		-0.087	_TFSLK(gl)GMTTK_
SNX4	Ubiquitylation	K361		-0.646	_GMTTK(gl)LFGQETPEQR_
SNX4	Ubiquitylation	K392		-0.896	_VLEEQINEGEQQLKSK(gl)_
SNX6	Ubiquitylation	K119	0.721	0.619	_LGEGEGSMTK(gl)EEFTK_
SNX6	Ubiquitylation	K291	0.222		_VSADEDLK(gl)LSDLLK_
SNX6	Ubiquitylation	K307		0.601	_ESQAAK(gl)DLLYR_
SNX8	Ubiquitylation	K201	0.466	0.439	_ESAQCVGDEFLNCK(gl)LATR_
SNX9	Ubiquitylation	K179		0.445	_SSSYFK(gl)DSESADAGGAQR_
SNX9	Phosphorylation	S198		0.523	_ASS(ph)SSMKIPLNK_
TRIP10	Phosphorylation	S296	0.064	0.030	_APS(ph)DSSLGTPSDGRPELR_