bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: SNX19

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNX19 0 0.076 0.820 -0.060

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNX19 Ubiquitylation K903 -0.094 _TQEQK(gl)LAAEK_
SNX19 Phosphorylation S699 0.364 -0.194 _SEPQS(ph)PTEELSEAETESKPQTEGK_

Background Information for SNX19:





Protein-protein Interactions for SNX19

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP6V0D1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNX19

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Phox IPR001683 0.24
Category members Phox_assoc IPR003114 0
Category members Sorting_nexin_C IPR013937 0
Category members PX_assoc_Snx13 IPR013996 0


Protein complexes (CORUM database) featuring SNX19

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SNX19

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0035091 phosphatidylinositol binding Database 0.62
Category members GO Category GO:0030659 cytoplasmic vesicle membrane Database 0.62
Category members GO Category GO:0007154 cell communication Database 0


© Copyright Svejstrup Laboratory 2015