Results for the Category
low-density lipoprotein particle receptor binding
(GO:0050750)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| LDLRAP1 | 2 | 0.870 | -0.890 | |||||
| HSP90B1 | 2 | 0.100 | 0.120 | 0.724 | 1.982 | -1.206 | 0.484 | 0.477 |
| APOB | 0 | 0.130 | 0.050 | -4.359 | 0.702 | |||
| DNAJA1 | 0 | 0.120 | -0.870 | -0.002 | -0.468 | -0.020 | -0.575 | -0.008 |
| SNX17 | 0 | 0.540 | -0.070 | |||||
| LANCL1 | 0 | 0.300 | -0.240 | -1.670 | ||||
| LANCL1 | 0 | 0.300 | -0.240 | 0.059 | 0.487 | |||
| LRPAP1 | 0 | -0.570 | 0.800 | |||||
| LRPAP1 | 0 | -0.570 | 0.800 | -0.311 | -0.181 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| DNAJA1 | Ubiquitylation | K32 | 0.112 | _LALK(gl)YHPDKNPNEGEK_ | |
| DNAJA1 | Ubiquitylation | K46 | 0.780 | _FK(gl)QISQAYEVLSDAK_ | |
| DNAJA1 | Ubiquitylation | K59 | -0.126 | 0.382 | _QISQAYEVLSDAK(gl)KR_ |
| DNAJA1 | Ubiquitylation | K60 | -0.126 | 0.360 | _QISQAYEVLSDAKK(gl)R_ |
| DNAJA1 | Ubiquitylation | K66 | 0.241 | 0.693 | _ELYDK(gl)GGEQAIK_ |
| DNAJA1 | Ubiquitylation | K136 | 0.203 | 1.222 | _NVICDK(gl)CEGR_ |
| DNAJA1 | Ubiquitylation | K144 | -0.122 | 0.230 | _K(gl)GAVECCPNCR_ |
| DNAJA1 | Phosphorylation | S335 | -0.112 | 0.143 | _VNFPENGFLS(ph)PDKLSLLEK_ |
| HSP90B1 | Ubiquitylation | K95 | 0.097 | 1.380 | _LIINSLYK(gl)NK_ |
| HSP90B1 | Ubiquitylation | K97 | -0.155 | 1.541 | _NK(gl)EIFLR_ |
| HSP90B1 | Ubiquitylation | K161 | 0.157 | 0.544 | _EELVK(gl)NLGTIAK_ |
| HSP90B1 | Ubiquitylation | K168 | 1.363 | _NLGTIAK(gl)SGTSEFLNK_ | |
| HSP90B1 | Phosphorylation | S306 | -0.709 | 0.213 | _TETVEEPMEEEEAAKEEKEES(ph)DDEAAVEEEEEEK_ |
| HSP90B1 | Ubiquitylation | K404 | -0.189 | 1.394 | _GLFDEYGSK(gl)K_ |
| HSP90B1 | Ubiquitylation | K405 | -0.189 | 1.394 | _GLFDEYGSK(gl)K_ |
| HSP90B1 | Ubiquitylation | K455 | 0.816 | 0.384 | _ETLQQHK(gl)LLK_ |
| HSP90B1 | Ubiquitylation | K593 | -0.763 | 0.376 | _FQNVAK(gl)EGVK_ |
| HSP90B1 | Ubiquitylation | K663 | -0.272 | _IMK(gl)AQAYQTGK_ | |
| HSP90B1 | Ubiquitylation | K671 | -0.264 | 0.676 | _AQAYQTGK(gl)DISTNYYASQK_ |
| HSP90B1 | Ubiquitylation | K682 | 0.380 | 1.163 | _DISTNYYASQK(gl)K_ |
| HSP90B1 | Ubiquitylation | K683 | 0.380 | 1.163 | _DISTNYYASQK(gl)K_ |
| LANCL1 | Ubiquitylation | K128 | 0.960 | 0.456 | _MNNEK(gl)QAEDCITR_ |
| LDLRAP1 | Ubiquitylation | K5 | 6.085 | 8.895 | _(ac)MDALK(gl)SAGR_ |
| LDLRAP1 | Phosphorylation | S14 | -0.662 | 0.149 | _ALIRS(ph)PSLAK_ |
| LRPAP1 | Ubiquitylation | K65 | -0.500 | _LNQLWEK(gl)AQR_ | |
| LRPAP1 | Ubiquitylation | K94 | -0.080 | _IQERDELAWK(gl)K_ | |
| SNX17 | Phosphorylation | S333 | -0.381 | _VTSSVPLPSGS(ph)TSSPGR_ |
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