RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ATP2A2	3	2.760	-1.150		0.192	-0.474	0.081	0.297
VAPB	2	1.440	-0.660				0.042	0.495
VAPB	2	1.440	-0.660			-2.551	0.014	0.056
ANXA7	1	-1.410	3.550	0.673			0.422	-0.159
SLC30A1	1	-0.070	0.080
ATP2C1	0	1.960	-1.170
HEXB	0	-0.370	0.060				0.103
HERPUD1	0	0.830	-0.630
PIK3CB	0	-1.390	2.350
PIK3CB	0	-0.710	1.450
PSEN1	0	0.930	-1.110
CHERP	0	-0.490	1.010	0.253	-0.239	0.275	0.284	0.212
DMPK	0	-0.990	1.550				0.369	0.295
TGFB1	0	-0.550	1.050
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
STIM2	0	1.400	-0.510
STC2	0	0.660	-0.870
TPT1	0	0.360	-0.510				-0.570	-0.005
TMEM165	0	-1.210	2.320
RMDN3	0	-0.260	0.790				-0.968	-0.080
ANK2	0	0.370	-0.920
ITGB1	0	0.390	-0.650				0.101	-0.036
PRKCA	0	0.750	-0.690				0.349	0.585
PRKCA	0	0.750	-0.690
ATP2B2	0	1.540	-0.900				0.593	0.487
TPCN2	0	0.360	0.190
STOML2	0	-1.000	1.080	0.526			0.025	-0.128
PRKCB	0	0.260	-0.530
PRKCB	0	0.260	-0.530				0.349	0.585
BCL2	0	0.910	-0.740
CALR	0	-1.300	2.220				0.480	0.054

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ANK2	Phosphorylation	S1459	0.673	0.675	_ES(ph)ESDQEQEEEIDM(ox)TSEK_
ANK2	Phosphorylation	S1461	0.678	0.687	_ESES(ph)DQEQEEEIDMTSEK_
ANK2	Phosphorylation	S3793	0.342	0.385	_AMIVPSS(ph)PSK_
ANK2	Phosphorylation	S3823	-0.465	-0.203	_GGS(ph)PIIQEPEEPSEHREESSPR_
ANK2	Phosphorylation	T3844		0.389	_T(ph)SLVIVESADNQPETCER_
ANK2	Phosphorylation	S3845	0.659	0.389	_KTS(ph)LVIVESADNQPETCER_
ANXA7	Ubiquitylation	K199	0.347		_AMK(gl)GFGTDEQAIVDVVANR_
ANXA7	Ubiquitylation	K430	0.263	0.610	_LYYAMK(gl)GAGTDDSTLVR_
ATP2A2	Ubiquitylation	K169	2.444	3.235	_LTSIK(gl)STTLR_
ATP2A2	Ubiquitylation	K436		2.681	_GVYEK(gl)VGEATETALTCLVEK_
ATP2A2	Ubiquitylation	K460	0.597	2.302	_MNVFDTELK(gl)GLSK_
ATP2A2	Ubiquitylation	K464	1.160	3.034	_GLSK(gl)IER_
ATP2A2	Ubiquitylation	K476	1.817	3.302	_ANACNSVIK(gl)QLMK_
ATP2A2	Ubiquitylation	K480		2.106	_ANACNSVIKQLMK(gl)_
ATP2A2	Ubiquitylation	K492	0.229		_K(gl)SMSVYCTPNKPSR_
ATP2A2	Ubiquitylation	K502	-0.998	1.220	_SMSVYCTPNK(gl)PSR_
ATP2A2	Ubiquitylation	K510	1.498	2.485	_TSMSK(gl)MFVK_
ATP2A2	Ubiquitylation	K514	1.598	2.466	_MFVK(gl)GAPEGVIDR_
ATP2A2	Ubiquitylation	K533	1.659	2.743	_VGSTK(gl)VPMTSGVK_
ATP2A2	Ubiquitylation	K541		2.787	_VPMTSGVK(gl)QK_
ATP2A2	Ubiquitylation	K543	1.447	3.874	_QK(gl)IMSVIR_
ATP2A2	Ubiquitylation	K611	5.174	4.269	_IEVASSVK(gl)LCR_
ATP2A2	Ubiquitylation	K628	0.545	2.714	_VIMITGDNK(gl)GTAVAICR_
ATP2A2	Ubiquitylation	K650	1.861	2.614	_IGIFGQDEDVTSK(gl)AFTGR_
ATP2A2	Phosphorylation	S663	0.605	0.621	_EFDELNPS(ph)AQR_
ATP2A2	Ubiquitylation	K712		2.111	_K(gl)AEIGIAMGSGTAVAK_
ATP2A2	Ubiquitylation	K757	2.081	3.431	_AIYNNMK(gl)QFIR_
ATP2A2	Ubiquitylation	K995	-1.164	1.549	_NYLEPGK(gl)ECVQPATK_
ATP2B2	Ubiquitylation	K15	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Phosphorylation	S17	0.515	0.902	_NS(ph)LKEANHDGDFGITLAELR_
ATP2B2	Ubiquitylation	K19	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Ubiquitylation	K48	1.326		_K(gl)IQESYGDVYGICTK_
ATP2B2	Ubiquitylation	K62	0.733		_IQESYGDVYGICTK(gl)LK_
ATP2B2	Ubiquitylation	K64	0.642	0.801	_LK(gl)TSPNEGLSGNPADLER_
ATP2B2	Ubiquitylation	K193	-0.102	0.773	_IEQEQK(gl)FTVIR_
ATP2B2	Ubiquitylation	K365		0.997	_SVLQGK(gl)LTK_
ATP2B2	Ubiquitylation	K747	1.309		_NEK(gl)GEIEQER_
ATP2B2	Ubiquitylation	K773		-0.186	_SSPTDK(gl)HTLVK_
ATP2B2	Ubiquitylation	K807	0.010	1.083	_QVVAVTGDGTNDGPALKK(gl)_
ATP2B2	Ubiquitylation	K921	-0.811	0.202	_NK(gl)PLISR_
ATP2B2	Phosphorylation	S1177	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1178	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1193	-0.342	-0.629	_IEDS(ph)EPHIPLIDDTDAEDDAPTKR_
ATP2C1	Ubiquitylation	K42	-0.715		_FQK(gl)IPNGENETMIPVLTSK_
ATP2C1	Ubiquitylation	K530	0.007	0.730	_YCTTYQSK(gl)GQTLTLTQQQR_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
CALR	Ubiquitylation	K48		0.703	_SDFGK(gl)FVLSSGK_
CALR	Ubiquitylation	K153	-0.924	0.619	_GK(gl)NVLINK_
CALR	Ubiquitylation	K159	-1.004	0.381	_NVLINK(gl)DIR_
CAV1	Ubiquitylation	K5	0.591	0.963	_(ac)SGGK(gl)YVDSEGHLYTVPIR_
CAV1	Phosphorylation	S6	0.836	0.688	_(ac)ADELS(ph)EKQVYDAHTK_
CAV1	Ubiquitylation	K8	0.244	0.734	_(ac)ADELSEK(gl)QVYDAHTK_
CAV1	Ubiquitylation	K26	0.724	0.894	_EQGNIYK(gl)PNNK_
CAV1	Ubiquitylation	K30	-0.008	0.317	_EQGNIYKPNNK(gl)AMADELSEK_
CAV1	Ubiquitylation	K39	0.690	1.170	_AMADELSEK(gl)QVYDAHTK_
CAV1	Phosphorylation	S76	0.607	0.527	_AMADELS(ph)EK_
CAV1	Ubiquitylation	K176		-0.259	_INLQK(gl)EI_
CHERP	Ubiquitylation	K177	0.538	1.097	_DAISAGK(gl)NWMFSNAK_
CHERP	Ubiquitylation	K901	0.763		_NK(gl)SYSFIAR_
DMPK	Phosphorylation	S1545		0.686	_RYS(ph)FRVPEEER_
DMPK	Phosphorylation	S1629	0.643	0.973	_SMS(ph)ASSGLSAR_
DMPK	Phosphorylation	S1651	0.478	0.828	_EFS(ph)GGSYSAK_
DMPK	Phosphorylation	S1721	1.103	1.216	_SLS(ph)LESTDR_
HERPUD1	Ubiquitylation	K100	-0.994	-1.217	_MPEINAK(gl)VAESTEEPAGSNR_
ITGB1	Ubiquitylation	K774	0.402		_MNAK(gl)WDTGENPIYK_
ITGB1	Ubiquitylation	K784	-0.172	0.350	_WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1	Ubiquitylation	K794	0.755	0.604	_SAVTTVVNPK(gl)YEGK_
PIK3CB	Ubiquitylation	K1044		0.990	_SEEEALKQFKQK(gl)_
PRKCA	Phosphorylation	S10	-0.650	0.036	_(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCA	Phosphorylation	S13	-1.038	0.335	_(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCA	Phosphorylation	S226	0.693	0.415	_STLNPQWNES(ph)FTFK_
PRKCA	Ubiquitylation	K316	-0.522	-0.535	_LGPAGNK(gl)VISPSEDR_
PRKCB	Phosphorylation	S10	-0.650	0.036	_(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCB	Phosphorylation	S13	-1.038	0.335	_(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCB	Phosphorylation	S226	0.693	0.415	_STLNPQWNES(ph)FTFK_
PRKCB	Ubiquitylation	K315	0.213	0.518	_ISQGTK(gl)VPEEK_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
RMDN3	Phosphorylation	S44	0.325	0.345	_S(ph)QSLPNSLDYTQTSDPGR_
RMDN3	Phosphorylation	S46	0.480	0.350	_SQS(ph)LPNSLDYTQTSDPGR_
RMDN3	Phosphorylation	S212	-0.096	0.101	_KDS(ph)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR_
RMDN3	Phosphorylation	S221	-0.016	0.270	_KDSLDLEEEAAS(ph)GASSALEAGGSSGLEDVLPLLQQADELHR_
SLC30A1	Ubiquitylation	K358	0.057		_NLIK(gl)ELR_
SLC30A1	Ubiquitylation	K444	-0.648	-0.959	_TQCALK(gl)QCCGTLPQAPSGK_
SLC30A1	Ubiquitylation	K501	-0.438	-0.716	_NMPNK(gl)QPESSL_
SLC30A1	Phosphorylation	S506		1.739	_NMPNKQPESS(ph)L_
STC2	Ubiquitylation	K100		-0.804	_FDAQGK(gl)SFIK_
STC2	Ubiquitylation	K104		-0.570	_SFIK(gl)DALK_
STC2	Ubiquitylation	K142		-1.768	_ECYLK(gl)HDLCAAAQENTR_
STIM2	Phosphorylation	S618	-0.616	-0.499	_SIVPSS(ph)PQPQR_
STIM2	Phosphorylation	S814	0.117	0.493	_ISS(ph)IPHDLCHNGEK_
STOML2	Ubiquitylation	K222		-0.107	_ESAINVAEGKK(gl)_
STOML2	Phosphorylation	T327	-0.188	-0.227	_APVPGT(ph)PDSLSSGSSR_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TMEM165	Ubiquitylation	K198	-1.517		_MSPDEGQEELEEVQAELK(gl)K_
TMEM165	Ubiquitylation	K199	-1.102		_MSPDEGQEELEEVQAELK(gl)K_
TMEM165	Ubiquitylation	K208	-1.496	-0.854	_TK(gl)LLNGPGDVETGTSITVPQKK_
TMEM165	Ubiquitylation	K227		-0.650	_LLNGPGDVETGTSITVPQK(gl)K_
TMEM165	Ubiquitylation	K228	-0.843	-0.650	_LLNGPGDVETGTSITVPQKK(gl)_
TPCN2	Ubiquitylation	K382		0.584	_QAMMEK(gl)VR_
TPT1	Phosphorylation	T39		-0.158	_T(ph)EGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTK_
TPT1	Phosphorylation	S53		-1.046	_TEGNIDDSLIGGNAS(ph)AEGPEGEGTESTVITGVDIVMNHHLQETSFTK_
TPT1	Ubiquitylation	K102		-0.063	_GK(gl)LEEQRPER_
TPT1	Ubiquitylation	K112	0.114	0.269	_VK(gl)PFMTGAAEQIK_
VAPB	Ubiquitylation	K3	0.174		_(ac)AK(gl)VEQVLSLEPQHELK_
VAPB	Ubiquitylation	K118	-0.217		_EAKPEDLMDSK(gl)LR_
VAPB	Ubiquitylation	K147	0.150	0.167	_IISTTASK(gl)TETPIVSK_
VAPB	Phosphorylation	S158	2.164	2.536	_SLS(ph)SSLDDTEVKK_
VAPB	Phosphorylation	S160	0.543	0.936	_SLSSS(ph)LDDTEVKK_
VAPB	Ubiquitylation	K167		0.270	_SLSSSLDDTEVK(gl)K_
VAPB	Ubiquitylation	K168		0.270	_SLSSSLDDTEVK(gl)K_
VAPB	Ubiquitylation	K180		1.211	_LMEECK(gl)R_
VAPB	Ubiquitylation	K188	0.176	0.874	_LQGEMMK(gl)LSEENR_
VAPB	Phosphorylation	S214	0.747	1.178	_VAHSDKPGS(ph)TSTASFR_