RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
FANCD2	5	-0.650	0.520	1.226	0.362	-0.007	1.535	0.808
RAD50	3	0.350	-0.420	0.165	0.571	0.509	0.691	0.587
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
NBN	2	-0.220	-0.170		0.708	0.569	-0.563	0.354
CHEK1	2	-1.170	1.560
CHEK1	2	-1.170	1.560
CHEK2	2	0.530	0.100
RAD9A	1	-2.070	3.350
ATR	1	-1.040	0.920	0.671			1.041	0.708
MRE11A	0	1.600	-0.730		0.145	0.420
MRE11A	0	1.600	-0.730	0.023			0.453	0.150
RAD51	0	-1.260	1.920
FANCE	0	-0.390	0.490
RAD1	0	0.550	0.120
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
ATM	0						0.398	0.474
FANCC	0	1.030	-0.520
FANCF	0	1.290	-1.060
FANCG	0	0.390	-0.740		0.107	0.986

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATM	Ubiquitylation	K307		-0.196	_GAYESTK(gl)WR_
ATM	Ubiquitylation	K331		-0.126	_GK(gl)YSSGFR_
ATM	Ubiquitylation	K385		-0.669	_ESSDYSVPCK(gl)R_
ATM	Ubiquitylation	K1101		-0.548	_LFQDTK(gl)GDSSR_
ATM	Ubiquitylation	K1109		-1.666	_LLK(gl)ALPLK_
ATM	Ubiquitylation	K1698		-1.026	_DASYTK(gl)ALK_
ATM	Ubiquitylation	K1738		-0.137	_SAAVTCLK(gl)NILATK_
ATM	Ubiquitylation	K2025		-1.497	_SIGEPDSLYGCGGGK(gl)MLQPITR_
ATR	Ubiquitylation	K32		-0.929	_ELGSATPEEYNTVVQK(gl)PR_
ATR	Phosphorylation	S435	0.516	0.284	_RLS(ph)SSLNPSK_
ATR	Ubiquitylation	K746		-1.823	_NLK(gl)ATSQHECSSSQLK_
ATR	Ubiquitylation	K1019	1.662		_TLGK(gl)QLNVNRR_
ATR	Ubiquitylation	K1600	-0.437		_FQALK(gl)AEK_
ATR	Ubiquitylation	K2106		-0.136	_AYEWEK(gl)AGR_
ATR	Ubiquitylation	K2604	0.657	1.118	_LQGVIK(gl)TR_
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
CHEK1	Ubiquitylation	K53	0.879		_AVDCPENIK(gl)K_
CHEK1	Ubiquitylation	K54	0.738		_AVDCPENIKK(gl)_
CHEK1	Phosphorylation	S296	-0.098	0.184	_VTS(ph)GGVSESPSGFSK_
CHEK1	Phosphorylation	S300		1.091	_VTSGGVS(ph)ESPSGFSK_
CHEK1	Phosphorylation	S302	1.750		_VTSGGVSES(ph)PSGFSK_
CHEK1	Phosphorylation	S317		1.903	_HIQSNLDFS(ph)PVNSASSEENVK_
CHEK1	Ubiquitylation	K399	-0.582		_ETCEK(gl)LGYQWK_
CHEK2	Phosphorylation	S260	3.670	3.632	_KFAIGS(ph)AR_
CHEK2	Ubiquitylation	K437		-0.826	_TQVSLK(gl)DQITSGK_
FANCC	Ubiquitylation	K552		-0.114	_ELLK(gl)ELR_
FANCD2	Ubiquitylation	K77		-0.288	_TGESQNQLAVDQIAFQK(gl)K_
FANCD2	Ubiquitylation	K137		0.364	_LQDEEASMGASYSKSLIK(gl)_
FANCD2	Ubiquitylation	K322		-0.535	_LQASQVK(gl)LK_
FANCD2	Ubiquitylation	K324		-0.384	_LQASQVKLK(gl)_
FANCD2	Ubiquitylation	K561	2.102	3.950	_K(gl)QLSSTVFKYK_
FANCD2	Phosphorylation	S592	1.311	1.350	_SES(ph)PSLTQER_
FANCD2	Phosphorylation	S717	2.435	3.130	_DGGPVTS(ph)QESGQK_
FANCD2	Phosphorylation	S1401		-0.015	_S(ph)QNSQESTADESEDDMSSQASK_
FANCD2	Phosphorylation	S1404		-0.348	_S(ph)QNSQESTADESEDDMSSQASK_
FANCD2	Phosphorylation	S1412	-1.471		_SQNSQESTADES(ph)EDDM(ox)SSQASK_
FANCE	Phosphorylation	S249	-0.010	-0.066	_SLESLADGGSAS(ph)PIKDQPVMAVK_
FANCF	Ubiquitylation	K186		-1.299	_LQEVGK(gl)AEAERPAR_
FANCF	Ubiquitylation	K331		-2.113	_FQSLCQAPPPLKDK(gl)_
FANCG	Ubiquitylation	K28		-0.599	_QAK(gl)VAQNSGLTLR_
FANCG	Ubiquitylation	K504		-1.806	_ATPEEKEQGAAFNCEQGCK(gl)SDAALQQLR_
MRE11A	Ubiquitylation	K387	0.442		_FSQK(gl)FVDR_
NBN	Phosphorylation	T335		-1.121	_T(ph)TTPGPSLSQGVSVDEK_
NBN	Phosphorylation	S341	3.085		_TTTPGPS(ph)LSQGVSVDEK_
NBN	Phosphorylation	S343	3.710	3.629	_TTTPGPSLS(ph)QGVSVDEK_
NBN	Phosphorylation	S397	2.719	1.458	_MLS(ph)QDAPTVK_
NBN	Phosphorylation	S432	-0.192	-0.395	_IPNYQLS(ph)PTK_
NBN	Phosphorylation	T434	-0.188	-0.683	_IPNYQLSPT(ph)KLPSINK_
NBN	Phosphorylation	S615	1.985	4.691	_IS(ph)QENEIGKK_
RAD1	Ubiquitylation	K46	0.748		_EHATCFATK(gl)NGIK_
RAD50	Ubiquitylation	K62	-1.069		_YICTGDFPPGTK(gl)GNTFVHDPK_
RAD50	Phosphorylation	S635	2.474	3.050	_LFDVCGS(ph)QDFESDLDR_
RAD50	Ubiquitylation	K753	0.394	0.397	_NK(gl)LQNVNR_
RAD50	Ubiquitylation	K933	0.397		_FQQEKEELINKK(gl)_
RAD50	Ubiquitylation	K1068	0.098		_LEENIDNIK(gl)R_
RAD50	Ubiquitylation	K1178	-0.548		_SDADENVSASDK(gl)RR_
RAD50	Ubiquitylation	K1285	2.195		_SEYVEK(gl)FYR_
RAD51	Ubiquitylation	K64	-1.228		_KELINIK(gl)GISEAK_
RAD9A	Phosphorylation	S277	-0.249	-0.052	_DSLLDGHFVLATLSDTDSHSQDLGS(ph)PER_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_