RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PPP1R12A	3	-1.630	3.440				0.245	-0.095
PPP1CA	3	2.150	-0.860
PPP1CA	3	2.150	-0.860	-0.250	0.634	0.981	-0.108	0.171
ITPR3	2	-0.190	-0.500				1.489	1.835
CAMK2G	2	-2.070	4.160
CAMK2G	2	-2.070	4.160
CAMK2G	2	-2.070	4.160		-0.654	0.073
CAMK2G	2	-2.070	4.160				0.559	1.698
ITPR1	2	-0.040	0.000				1.489	1.835
ITPR1	2	-0.040	0.000				0.768	0.643
PPP1CC	2	0.390	-0.090
PPP1CC	2	0.390	-0.090	0.568	0.526	0.917	-0.533	0.173
PPP1CB	2	-0.790	1.500
PPP1CB	2	-0.790	1.500	0.568	0.526	0.917	-0.533	0.173
PPP1CB	2	-0.790	1.500	0.439	0.908	1.224	-0.104	0.029
CAMK2B	1	1.200	-0.790
CAMK2B	1	1.200	-0.790		-0.654	0.073
CAMK2B	1	1.200	-0.790	-0.619			0.544	0.125
CAMK2B	1	1.200	-0.790				0.559	1.698
RAF1	1	2.020	-1.230
KRAS	1	-0.510	0.620				1.031	0.887
KRAS	1	-0.510	0.620				0.246	-0.346
CALM2	1	-0.690	0.700		1.911
CALM2	1	-0.690	0.700				0.877	-4.680
CALM3	1	-0.190	0.120		1.911
CALM3	1	-0.190	0.120				0.877	-4.680
MAP2K1	1	-1.590	2.780
RPS6KA3	1	-1.550	2.890
CALM1	1	-0.440	0.360		1.911
CALM1	1	-0.440	0.360				0.877	-4.680
NRAS	1	1.810	-0.720				0.246	-0.346
CREBBP	0	0.840	-0.950				-3.889	-1.071
CAMK2A	0	-0.430	0.130		-0.654	0.073
CAMK2A	0	-0.430	0.130	-0.619			0.544	0.125
PRKACA	0	0.380	-0.680		-1.005	-0.697	0.234	0.487
RPS6KA6	0	-1.250	1.770
ARAF	0	0.550	-0.670
ARAF	0	0.550	-0.670
EP300	0	-1.210	1.320	-1.089			-1.694	-0.723
PLCB4	0	0.640	-0.400
MAPK3	0
PPP3CB	0	-1.240	2.140		-0.298	1.130
PPP3CB	0	-1.240	2.140				0.923	0.537
RPS6KA1	0	-0.160	-0.660
RPS6KA1	0	-0.160	-0.660
PPP3CC	0	-0.380	1.050		-0.298	1.130
PPP3CC	0	-0.380	1.050				0.923	0.537
ITPR2	0	-1.020	0.610				0.952	0.981
MAP2K2	0	-0.610	0.080
MAP2K2	0	-0.610	0.080
RAP1B	0	-0.520	0.540	-0.200			0.374	0.556
ATF4	0	-1.090	1.510
PPP3CA	0	1.550	-1.230		-0.298	1.130
PPP3CA	0	1.550	-1.230				0.923	0.537
PRKACB	0	1.740	-1.200		-1.064
PRKACB	0	1.740	-1.200		-1.005	-0.697	0.234	0.487
CAMK2D	0	-0.260	0.500		-0.654	0.073
CAMK2D	0	-0.260	0.500	-0.619			0.544	0.125
CAMK2D	0	-0.260	0.500
CAMK4	0	0.780	-0.790
PRKCA	0	0.750	-0.690				0.349	0.585
PRKCA	0	0.750	-0.690
GNAQ	0	0.140	-0.310				0.052	0.449
BRAF	0
PRKCB	0	0.260	-0.530
PRKCB	0	0.260	-0.530				0.349	0.585
HRAS	0	1.470	-0.520
CALML3	0	0.460	-0.670
CALML5	0	-0.980	1.530
PLCB1	0	-0.300	-0.220

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ARAF	Phosphorylation	T227		0.017	_STSTPNVHMVSTT(ph)APMDSNLIQLTGQSFSTDAAGSR_
ARAF	Phosphorylation	S260	0.245		_GS(ph)PSPASVSSGR_
ARAF	Ubiquitylation	K543	-1.068	-0.962	_ISSNCPK(gl)AMR_
ARAF	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
ATF4	Phosphorylation	S69		0.252	_AGSSEWLAVDGLVS(ph)PSNNSK_
ATF4	Phosphorylation	S248	0.569	-0.323	_SLPS(ph)PGVLCGSAR_
ATF4	Ubiquitylation	K267		-1.961	_PYDPPGEK(gl)MVAAK_
ATF4	Ubiquitylation	K329		-0.035	_ADSLAK(gl)EIQYLK_
BRAF	Phosphorylation	S151	-0.685	-0.629	_SNPKS(ph)PQKPIVR_
BRAF	Phosphorylation	S363	-0.023	-0.241	_S(ph)SSAPNVHINTIEPVNIDDLIR_
BRAF	Phosphorylation	S365	-0.286	0.012	_SSS(ph)APNVHINTIEPVNIDDLIR_
BRAF	Phosphorylation	S399	-0.890	-0.527	_GDGGSTTGLS(ph)ATPPASLPGSLTNVK_
BRAF	Phosphorylation	T401	-0.525		_GDGGSTTGLSAT(ph)PPASLPGSLTNVK_
BRAF	Phosphorylation	S446	0.246	0.349	_RDS(ph)SDDWEIPDGQITVGQR_
BRAF	Phosphorylation	S447	0.579	0.623	_RDSS(ph)DDWEIPDGQITVGQR_
BRAF	Phosphorylation	S729	0.208	0.219	_SAS(ph)EPSLNR_
CALM1	Ubiquitylation	K78	0.061		_DGDGTITTK(gl)ELGTVMR_
CALM1	Ubiquitylation	K142		0.922	_VFDK(gl)DGNGYISAAELR_
CALM2	Ubiquitylation	K78	0.061		_DGDGTITTK(gl)ELGTVMR_
CALM2	Ubiquitylation	K142		0.922	_VFDK(gl)DGNGYISAAELR_
CALM3	Ubiquitylation	K78	0.061		_DGDGTITTK(gl)ELGTVMR_
CALM3	Ubiquitylation	K142		0.922	_VFDK(gl)DGNGYISAAELR_
CAMK2A	Ubiquitylation	K251	-0.437		_DLINK(gl)MLTINPAK_
CAMK2B	Ubiquitylation	K147		-1.064	_DLKPENLLLASK(gl)CK_
CAMK2B	Ubiquitylation	K251	-0.437		_DLINK(gl)MLTINPAK_
CAMK2D	Ubiquitylation	K251	-0.437		_DLINK(gl)MLTINPAK_
CAMK2D	Phosphorylation	S330	0.412	0.370	_KPDGVKES(ph)TESSNTTIEDEDVK_
CAMK2D	Phosphorylation	T331		-0.174	_KPDGVKES(ph)TESSNTTIEDEDVK_
CAMK2D	Phosphorylation	T336	0.615	0.376	_ESTESSNT(ph)TIEDEDVK_
CAMK2D	Phosphorylation	T337	0.450		_ESTESSNTT(ph)IEDEDVK_
CAMK2G	Ubiquitylation	K147		-1.064	_DLKPENLLLASK(gl)CK_
CAMK2G	Ubiquitylation	K251	-0.437		_DLINK(gl)MLTINPAK_
CAMK2G	Phosphorylation	S365		0.765	_GSTES(ph)CNTTTEDEDLK_
CAMK4	Phosphorylation	S360	-0.256	0.086	_DPS(ph)PIQDGNEDMK_
CREBBP	Phosphorylation	S2093	0.037	0.097	_SIS(ph)PSALQDLLR_
EP300	Phosphorylation	S1038	-0.672	-0.349	_TEIKEEEDQPSTSATQSS(ph)PAPGQSK_
EP300	Phosphorylation	S1726	0.994	0.627	_LGLGLDDESNNQQAAATQS(ph)PGDSRR_
EP300	Phosphorylation	S2328	-1.092	0.725	_PQSQPPHSSPS(ph)PR_
GNAQ	Ubiquitylation	K16	0.245		_TLESIMACCLSEEAK(gl)EAR_
GNAQ	Ubiquitylation	K102	-0.299		_IPYK(gl)YEHNK_
HRAS	Ubiquitylation	K170	-1.005		_K(gl)LNPPDESGPGCMSCK_
ITPR1	Ubiquitylation	K529	1.377		_EK(gl)GGEGPLVR_
ITPR1	Phosphorylation	S934	0.318	-0.802	_KQS(ph)VFSAPSLSAGASAAEPLDR_
ITPR1	Phosphorylation	S937		-0.026	_KQSVFS(ph)APSLSAGASAAEPLDR_
ITPR1	Ubiquitylation	K1534		-0.220	_TLAMVAK(gl)GR_
ITPR1	Phosphorylation	S1598	1.165	0.362	_RDS(ph)VLAASR_
ITPR1	Phosphorylation	S1832	0.650	0.560	_VAS(ph)FSIPGSSSR_
ITPR1	Ubiquitylation	K2597		-0.819	_NK(gl)NLDWFPR_
ITPR1	Ubiquitylation	K2628		-0.010	_ILQDK(gl)LNSTMK_
ITPR1	Phosphorylation	S2670	1.132	1.555	_LGFVDVQNCIS(ph)R_
ITPR2	Ubiquitylation	K909		-0.247	_LSK(gl)FQDGGNNVMR_
ITPR2	Phosphorylation	S1160	0.443	0.895	_GGEEPIEESNILS(ph)PVQDGTK_
ITPR3	Ubiquitylation	K529	1.377		_EK(gl)GGEGPLVR_
ITPR3	Phosphorylation	S934	0.318	-0.802	_KQS(ph)VFSAPSLSAGASAAEPLDR_
ITPR3	Phosphorylation	S937		-0.026	_KQSVFS(ph)APSLSAGASAAEPLDR_
ITPR3	Ubiquitylation	K1534		-0.220	_TLAMVAK(gl)GR_
ITPR3	Phosphorylation	S1832	0.650	0.560	_VAS(ph)FSIPGSSSR_
ITPR3	Ubiquitylation	K2597		-0.819	_NK(gl)NLDWFPR_
ITPR3	Ubiquitylation	K2628		-0.010	_ILQDK(gl)LNSTMK_
ITPR3	Phosphorylation	S2670	1.132	1.555	_LGFVDVQNCIS(ph)R_
KRAS	Ubiquitylation	K128	1.528	1.433	_TVDTK(gl)QAHELAK_
KRAS	Ubiquitylation	K235	0.591	0.087	_TVDTK(gl)QAQDLAR_
KRAS	Ubiquitylation	K254	-0.450	-0.156	_SYGIPFIETSAK(gl)TR_
MAP2K1	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K1	Phosphorylation	S385		0.066	_RSDAEEVDFAGWLCSTIGLNQPS(ph)TPTHAAGV_
MAP2K1	Phosphorylation	T386		0.377	_RSDAEEVDFAGWLCSTIGLNQPST(ph)PTHAAGV_
MAP2K2	Phosphorylation	S23	0.873	0.258	_RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK_
MAP2K2	Phosphorylation	T25		0.439	_RKPVLPALTINPTIAEGPSPT(ph)SEGASEANLVDLQK_
MAP2K2	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K2	Phosphorylation	S293		-0.361	_ELEAIFGRPVVDGEEGEPHS(ph)ISPR_
MAP2K2	Phosphorylation	S295	-0.234	0.026	_ELEAIFGRPVVDGEEGEPHSIS(ph)PR_
MAP2K2	Phosphorylation	T394	0.570	0.158	_LNQPGT(ph)PTR_
MAPK3	Phosphorylation	Y204	-0.807	-2.487	_IADPEHDHTGFLTEY(ph)VATR_
MAPK3	Ubiquitylation	K289		-0.608	_NYLQSLPSKTK(gl)_
NRAS	Ubiquitylation	K128	1.528	1.433	_TVDTK(gl)QAHELAK_
PLCB1	Phosphorylation	S1199	-0.494		_TPS(ph)SEELGGDIPGKEFDTPL_
PLCB1	Phosphorylation	S1200		-0.483	_TPSS(ph)EELGGDIPGKEFDTPL_
PLCB4	Ubiquitylation	K284	1.083	0.038	_K(gl)GLISSDGFCR_
PPP1CA	Ubiquitylation	K6	0.594	0.414	_(ac)SDSEK(gl)LNLDSIIGR_
PPP1CA	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CA	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CA	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CA	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CA	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CB	Ubiquitylation	K146	0.352		_FNIK(gl)LWK_
PPP1CB	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CB	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CC	Ubiquitylation	K35	-0.280	-0.504	_GSKPGK(gl)NVQLQENEIR_
PPP1CC	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CC	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CC	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CC	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CC	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CC	Phosphorylation	T320		-0.561	_KPNATRPVT(ph)PPR_
PPP1CC	Ubiquitylation	K328	0.848	0.425	_GMITK(gl)QAK_
PPP1R12A	Phosphorylation	S299	2.277	2.747	_KS(ph)PLIESTANMDNNQSQK_
PPP1R12A	Phosphorylation	S422	0.927	0.960	_IS(ph)PKEEER_
PPP1R12A	Phosphorylation	T443	0.098	-0.110	_T(ph)GSYGALAEITASK_
PPP1R12A	Phosphorylation	S445	0.244	0.338	_KTGS(ph)YGALAEITASK_
PPP1R12A	Phosphorylation	S507	0.017	0.208	_RLAS(ph)TSDIEEKENR_
PPP1R12A	Phosphorylation	S908	0.375		_S(ph)GSYSYLEER_
PPP1R12A	Phosphorylation	S910	0.488	0.782	_SGS(ph)YSYLEER_
PPP3CA	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CA	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CA	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CA	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PPP3CB	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CB	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CB	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CB	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PPP3CC	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CC	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CC	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CC	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PRKACA	Ubiquitylation	K30	-0.143		_AKEDFLKK(gl)_
PRKACA	Ubiquitylation	K93	0.839	0.714	_QIEHTLNEK(gl)R_
PRKACB	Ubiquitylation	K30	-0.143		_AKEDFLKK(gl)_
PRKACB	Ubiquitylation	K93	0.839	0.714	_QIEHTLNEK(gl)R_
PRKACB	Phosphorylation	T243		-0.835	_T(ph)WTLCGTPEYLAPEIILSK_
PRKACB	Phosphorylation	T245	-0.116	-0.102	_TWT(ph)LCGTPEYLAPEIILSK_
PRKCA	Phosphorylation	S10	-0.650	0.036	_(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCA	Phosphorylation	S13	-1.038	0.335	_(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCA	Phosphorylation	S226	0.693	0.415	_STLNPQWNES(ph)FTFK_
PRKCA	Ubiquitylation	K316	-0.522	-0.535	_LGPAGNK(gl)VISPSEDR_
PRKCB	Phosphorylation	S10	-0.650	0.036	_(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCB	Phosphorylation	S13	-1.038	0.335	_(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCB	Phosphorylation	S226	0.693	0.415	_STLNPQWNES(ph)FTFK_
PRKCB	Ubiquitylation	K315	0.213	0.518	_ISQGTK(gl)VPEEK_
RAF1	Phosphorylation	S29	0.028	-0.571	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	T31	0.028	-0.669	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	S244		0.053	_YSTPHAFTFNTSS(ph)PSSEGSLSQR_
RAF1	Phosphorylation	S259	-0.069	0.054	_STS(ph)TPNVHM(ox)VSTTLPVDSR_
RAF1	Phosphorylation	S301		-0.651	_SHSESASPSALSSSPNNLS(ph)PTGWSQPK_
RAF1	Phosphorylation	T303		-0.664	_SHSESASPSALSSSPNNLSPT(ph)GWSQPK_
RAF1	Phosphorylation	S497		-0.449	_SRWS(ph)GSQQVEQPTGSVLWMAPEVIR_
RAF1	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
RAF1	Phosphorylation	S642	-0.197	0.463	_AAHTEDINACTLTTS(ph)PR_
RAP1B	Ubiquitylation	K174	0.197		_KTPVPGK(gl)AR_
RPS6KA1	Phosphorylation	S227	0.363	0.496	_AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA1	Phosphorylation	T231	0.315		_KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA1	Ubiquitylation	K316		-1.156	_LGSGPDGAEEIK(gl)R_
RPS6KA1	Phosphorylation	T359	-0.149	-0.339	_T(ph)PKDSPGIPPSAGAHQLFR_
RPS6KA1	Phosphorylation	S363	-0.711	-0.697	_TPKDS(ph)PGIPPSAGAHQLFR_
RPS6KA1	Ubiquitylation	K566		-0.152	_ICDFGFAK(gl)QLR_
RPS6KA3	Phosphorylation	S227	0.363	0.496	_AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA3	Phosphorylation	T231	0.315		_KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA3	Ubiquitylation	K322	-0.076	-0.376	_LGAGPDGVEEIK(gl)R_
RPS6KA3	Phosphorylation	T365	-0.892	-1.003	_T(ph)PKDSPGIPPSANAHQLFR_
RPS6KA3	Phosphorylation	S369	-0.621	-0.862	_TPKDS(ph)PGIPPSANAHQLFR_
RPS6KA3	Ubiquitylation	K566		-0.152	_ICDFGFAK(gl)QLR_
RPS6KA3	Phosphorylation	S715	-0.923	-0.880	_NQS(ph)PVLEPVGR_
RPS6KA6	Phosphorylation	S227	0.363	0.496	_AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA6	Phosphorylation	T231	0.315		_KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA6	Ubiquitylation	K566		-0.152	_ICDFGFAK(gl)QLR_