RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CACYBP	2	0.480	-0.310	1.995	0.414	0.588	0.866	-0.290
TEAD2	0	0.050	-0.130
BMP7	0
ADNP2	0	0.130	0.020				0.959	0.001
TMEM109	0	1.100	-0.740	-0.686	0.258	-1.625	-0.139	-0.225
HTRA2	0	1.220	-0.530		0.602		-0.023	1.287
NFE2L2	0	1.610	-1.200
PARK7	0	-0.660	0.930
TNFAIP3	0	0.760	-0.500
SRSF6	0	0.510	-0.580	0.873	0.221	0.612	0.582	0.508
SOX4	0	1.610	-0.930
BECN1	0	0.080	-0.010
NPC1	0	0.620	-0.700				0.275	0.103
SMAD4	0	0.420	-0.390		0.020	0.556		-0.485
NCK1	0	-0.370	0.580
DUS2	0	-0.830	1.180
STAT3	0	0.200	-1.270					0.334
MGMT	0	-0.490	1.130		-0.643	0.047
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADNP2	Ubiquitylation	K872	-1.370	-1.320	_VRPQAEGTPGSTGK(gl)R_
BECN1	Ubiquitylation	K237		-0.057	_EYSEFK(gl)R_
BECN1	Ubiquitylation	K324		0.066	_MGLK(gl)FQR_
BMP7	Ubiquitylation	K178		-0.107	_IYK(gl)DYIR_
CACYBP	Phosphorylation	S3	1.210	1.073	_(ac)AS(ph)EELQKDLEEVK_
CACYBP	Ubiquitylation	K19	0.761	0.125	_VLLEK(gl)ATR_
CACYBP	Ubiquitylation	K33	5.154		_VRDALTAEK(gl)SK_
CACYBP	Ubiquitylation	K41	0.333		_SKIETEIK(gl)NK_
CACYBP	Ubiquitylation	K43	0.550		_SKIETEIK(gl)NK_
CACYBP	Ubiquitylation	K51	-0.494		_K(gl)AELLDNEKPAAVVAPITTGYTVK_
CACYBP	Ubiquitylation	K146	0.061	-0.044	_VK(gl)TDTVLILCR_
CACYBP	Ubiquitylation	K196		-0.454	_EKPSYDTETDPSEGLMNVLK(gl)K_
CACYBP	Ubiquitylation	K197		-0.454	_EKPSYDTETDPSEGLMNVLK(gl)K_
CACYBP	Ubiquitylation	K207	0.581		_IYEDGDDDMK(gl)R_
CACYBP	Ubiquitylation	K212	0.244	0.832	_TINK(gl)AWVESR_
CACYBP	Ubiquitylation	K223	0.413		_EKQAK(gl)GDTEF_
DUS2	Ubiquitylation	K337		-1.649	_LSAK(gl)TSEQTGEPAEDTSGVIK_
HTRA2	Ubiquitylation	K237	-1.868	-0.270	_IQTK(gl)EPLPTLPLGR_
MGMT	Ubiquitylation	K39	1.069	0.395	_(ac)MDKDCEMK(gl)R_
MGMT	Ubiquitylation	K209	0.024	-0.353	_LGK(gl)PGLGGSSGLAGAWLK_
NCK1	Phosphorylation	S85	-0.027	-0.877	_RKPS(ph)VPDSASPADDSFVDPGER_
NCK1	Phosphorylation	S91		0.493	_RKPSVPDSAS(ph)PADDSFVDPGER_
NFE2L2	Ubiquitylation	K65		-0.831	_QEQLQK(gl)EQEK_
NPC1	Ubiquitylation	K1191		0.981	_AFTVSMK(gl)GSR_
PARK7	Ubiquitylation	K41	0.222	0.590	_VTVAGLAGK(gl)DPVQCSR_
PARK7	Ubiquitylation	K93	-0.291		_EILK(gl)EQENR_
PARK7	Ubiquitylation	K132	0.639		_VTTHPLAKDK(gl)_
PRKD1	Phosphorylation	S207	0.941	1.048	_RLS(ph)NVSLTGVSTIR_
PRKD1	Phosphorylation	T219	-0.068	-0.162	_T(ph)SSAELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S221	-0.662	-0.500	_TSS(ph)AELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S225	-0.970	-0.919	_TSSAELSTS(ph)APDEPLLSPVSPGFEQK_
PRKD1	Phosphorylation	S236		-0.132	_TSSAELSTSAPDEPLLSPVS(ph)PGFEQK_
PRKD1	Phosphorylation	S251	0.474	0.751	_SNS(ph)QSYIGRPIHLDK_
PRKD1	Phosphorylation	S399	0.023	0.162	_TIS(ph)PSTSNNIPLMR_
PRKD1	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD1	Phosphorylation	S744	-0.226	-0.287	_S(ph)VVGTPAYLAPEVLR_
SOX4	Phosphorylation	S354		-0.003	_SSAASSPAAGRS(ph)PADHR_
SRSF6	Ubiquitylation	K101	0.427		_DK(gl)YGPPVR_
SRSF6	Ubiquitylation	K143	0.804		_QAGEVTYADAHK(gl)ER_
SRSF6	Ubiquitylation	K165	0.740		_ALDK(gl)LDGTEINGR_
SRSF6	Phosphorylation	S303	-0.953	-0.594	_SNS(ph)PLPVPPSK_
STAT3	Ubiquitylation	K177	0.957		_VVENLQDDFDFNYK(gl)TLK_
STAT3	Ubiquitylation	K180	1.179		_TLK(gl)SQGDMQDLNGNNQSVTR_
STAT3	Ubiquitylation	K244	0.262		_TLTDEELADWK(gl)R_
STAT3	Phosphorylation	T714		-0.338	_FICVT(ph)PTTCSNTIDLPMS(ph)PR_
STAT3	Phosphorylation	S727	-0.079	0.156	_FICVTPTTCSNTIDLPMS(ph)PR_
TEAD2	Ubiquitylation	K50	1.259	0.615	_IILSDEGK(gl)MYGR_
TEAD2	Ubiquitylation	K262		-0.150	_VCSFGK(gl)QVVEK_
TMEM109	Ubiquitylation	K46	-1.303	-0.093	_RDFAPPGQQK(gl)R_
TMEM109	Ubiquitylation	K215		0.498	_ASGAQLEAK(gl)VR_
TNFAIP3	Ubiquitylation	K722	0.496	0.176	_ASCK(gl)NILACR_