RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
ERCC8	2	-0.520	0.810		1.603	2.305
DDB2	2	0.570	-0.690		-1.550	1.027
TRAF2	1	-0.570	0.540
TRAF2	1	-0.570	0.540
RNF220	1	-0.930	1.070
LTN1	1	2.260	-1.050				0.623	0.410
UBE2T	0	0.090	0.230
CNOT4	0	0.000	-0.080
RNF13	0	-0.590	0.720
RNF13	0	0.180	-0.460
STUB1	0	-1.420	2.320	-0.284			0.442	-0.104
TRIM37	0	0.060	0.540
RNF8	0	1.030	-0.670
TRIM21	0	-0.230	-0.010		-0.266	-0.252
UHRF2	0	-0.640	0.600	0.592	-0.256	0.358	0.108	0.276
UHRF2	0	-0.640	0.600				0.561	0.402
RCHY1	0	-0.710	1.020
RNF187	0	0.420	0.120
RNF213	0	-0.030	0.150				0.735	0.428
MARCH5	0	1.370	-0.580				0.448	-0.695
TRIM13	0	1.450	-0.930

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
CNOT4	Phosphorylation	S2	-0.674	-1.015	_(ac)S(ph)RSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICR_
CNOT4	Phosphorylation	S4	-0.674	-0.627	_S(ph)PDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICR_
DDB2	Phosphorylation	S24	-1.622	-0.259	_S(ph)RSPLELEPEAK_
DDB2	Phosphorylation	S26	-1.330	-0.351	_S(ph)PLELEPEAK_
DDB2	Ubiquitylation	K151	0.781		_DKPTFIK(gl)GIGAGGSITGLK_
DDB2	Ubiquitylation	K187	1.683	3.110	_LQDFK(gl)GNILR_
DDB2	Ubiquitylation	K309		1.567	_LLTTDQK(gl)SEIR_
DDB2	Ubiquitylation	K362	3.835	2.315	_YPDPNFK(gl)SCTPYELR_
LTN1	Ubiquitylation	K80		0.174	_DVTTK(gl)LK_
LTN1	Ubiquitylation	K987		-0.305	_TDFK(gl)EQDIK_
LTN1	Ubiquitylation	K1362	-1.661		_EQLLSHK(gl)LPAR_
MARCH5	Ubiquitylation	K40		-0.422	_GSTK(gl)WVHQACLQR_
MARCH5	Ubiquitylation	K54		0.447	_WVDEK(gl)QR_
RCHY1	Ubiquitylation	K135	0.341		_HK(gl)CIENVSR_
RNF13	Ubiquitylation	K273	1.281		_CVDPWLTK(gl)TK_
RNF187	Ubiquitylation	K130	-1.320	-0.189	_GK(gl)ENK(gl)GSVEIMR_
RNF187	Ubiquitylation	K133	-0.725	-0.590	_GK(gl)ENK(gl)GSVEIMR_
RNF187	Ubiquitylation	K176		-0.774	_KALTDYK(gl)K_
RNF187	Ubiquitylation	K177	-1.501	-0.405	_ALTDYKK(gl)_
RNF187	Ubiquitylation	K223	-2.024	-0.891	_SLLQAVSELEK(gl)K_
RNF187	Ubiquitylation	K224		-1.833	_SLLQAVSELEK(gl)K_
RNF213	Ubiquitylation	K1079	0.908	0.208	_ILANVTEDAK(gl)R_
RNF213	Phosphorylation	S1258	-0.455	-0.497	_EDQEAAELLS(ph)EPEEESER_
RNF213	Ubiquitylation	K2016		-0.750	_MQLNVK(gl)NVPLK_
RNF213	Phosphorylation	S2273	0.353	-0.375	_DFATPSLHTSDQS(ph)PGK_
RNF213	Ubiquitylation	K4312		-0.939	_DVVK(gl)QQGLR_
RNF220	Ubiquitylation	K362	1.803		_FEEYEWCGQK(gl)R_
RNF220	Ubiquitylation	K451	0.234		_ITPEFSK(gl)WASDEMPSTSNGESSK_
RNF8	Phosphorylation	S157	-0.377	-0.438	_KFS(ph)LDELAGPGAEGPSNLK_
STUB1	Phosphorylation	S19	0.041	0.082	_LGAGGGS(ph)PEKS(ph)PSAQELK_
STUB1	Ubiquitylation	K22	0.017	-0.536	_LGAGGGSPEK(gl)SPSAQELK_
STUB1	Phosphorylation	S23	0.078	0.165	_LGAGGGS(ph)PEKS(ph)PSAQELK_
STUB1	Ubiquitylation	K30	-0.704	-0.765	_SPSAQELK(gl)EQGNR_
STUB1	Ubiquitylation	K41	-0.158		_K(gl)YPEAAACYGR_
STUB1	Ubiquitylation	K125	0.325	-0.191	_AYSLAK(gl)EQR_
STUB1	Phosphorylation	S273	-0.431	-0.250	_S(ph)PLTQEQLIPNLAMK_
TRAF2	Phosphorylation	T7	-0.822	-1.190	_(ac)AAASVT(ph)PPGSLELLQPGFSK_
TRAF2	Ubiquitylation	K27	-0.253	2.194	_TLLGTK(gl)LEAK_
TRAF2	Ubiquitylation	K119		0.519	_GTLK(gl)EYESCHEGR_
TRAF2	Ubiquitylation	K176	-1.233	1.022	_APCCGADVK(gl)AHHEVCPK_
TRAF2	Ubiquitylation	K207	0.147	0.918	_FQDHVK(gl)TCGK_
TRAF2	Ubiquitylation	K481	-0.507	0.417	_MEAK(gl)NSYVR_
TRIM13	Ubiquitylation	K81		-0.953	_GIVEK(gl)YNK_
TRIM13	Ubiquitylation	K168		-0.117	_LDTLETSK(gl)R_
TRIM37	Ubiquitylation	K679	-0.977	-0.642	_LK(gl)TQMAEVR_
TRIM37	Ubiquitylation	K693	-1.498	-0.586	_TDVK(gl)NTLSEIK_
UBE2T	Ubiquitylation	K91	-0.306	0.175	_ICLDVLK(gl)LPPK_
UBE2T	Ubiquitylation	K141	-0.260		_YNKPAFLK(gl)NAR_
UBE2T	Ubiquitylation	K192		-0.193	_ASQLVGIEKK(gl)_
UHRF2	Ubiquitylation	K573	-0.456		_YDGIYK(gl)VVK_