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Query: TRIM13

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TRIM13 0 -0.117 1.450 -0.930

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TRIM13 Ubiquitylation K168 -0.117 _LDTLETSK(gl)R_
TRIM13 Ubiquitylation K81 -0.953 _GIVEK(gl)YNK_

Background Information for TRIM13:


Pubmed-TRIM13 »
Uniprot-TRIM13 »
Biogrid-TRIM13 »
ProteomicsDB-TRIM13 »

Tumorportal-TRIM13 »
COSMIC-TRIM13 »
GenomeRNAi-TRIM13 »
Genecards-TRIM13


Protein-protein Interactions for TRIM13
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait COMMD10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KIAA1467 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KIR3DL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TEX28 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM13 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TRIM13
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_B-box IPR000315 0
Category members Znf_RING IPR001841 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring TRIM13
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TRIM13
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members GO Category GO:0010942 positive regulation of cell death Database 0.82
Category members GO Category GO:0010332 response to gamma radiation Database 0.52
Category members GO Category GO:0030433 ER-associated ubiquitin-dependent protein catabolic process Database 0.33
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members GO Category GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process Database 0.23
Category members GO Category GO:0051865 protein autoubiquitination Database 0.18
Category members GO Category GO:0016239 positive regulation of macroautophagy Database 0.09
Category members GO Category GO:0004871 signal transducer activity Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0009653 anatomical structure morphogenesis Database 0
Category members GO Category GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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