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Query: RNF220

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RNF220 1 2.873 -0.930 1.070

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RNF220 Ubiquitylation K362 1.803 _FEEYEWCGQK(gl)R_
RNF220 Ubiquitylation K451 0.234 _ITPEFSK(gl)WASDEMPSTSNGESSK_

Background Information for RNF220:


Pubmed-RNF220 »
Uniprot-RNF220 »
Biogrid-RNF220 »
ProteomicsDB-RNF220 »

Tumorportal-RNF220 »
COSMIC-RNF220 »
GenomeRNAi-RNF220 »
Genecards-RNF220


Protein-protein Interactions for RNF220
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C1QBP Cat. description Hein, Mann, Cell 2015
Category members IP bait CLEC3A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UBE2E3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WDR5B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZC4H2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RNF220
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_RING IPR001841 0
Category members Peptidase_M20_dimer IPR011650 0


Protein complexes (CORUM database) featuring RNF220
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RNF220
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members GO Category GO:0051865 protein autoubiquitination Database 0.18
Category members GO Category GO:0016567 protein ubiquitination Database 0.07


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