RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PKD1	0	-0.900	0.980
LRP6	0	0.210	0.050
PLXNA2	0	-1.160	1.870				0.107	0.180
PLXNA2	0	1.880	-0.800				0.107	0.180
TCF7	0	1.040	-0.330	-0.741
PHGDH	0	-0.190	-0.280	0.032	-0.024	-0.302	1.449	0.834
CECR2	0	1.060	-0.940	-1.272			0.502	0.344
SALL4	0	0.590	0.130	-0.080	0.063	0.213	0.247	0.009
SALL1	0			-0.080	0.063	0.213	0.247	0.009
FKBP8	0	-1.260	1.670				-0.042	0.441
FKBP8	0	-1.260	1.670	-1.108	-0.333	-1.072
PLOD3	0	1.080	-0.590
PLOD3	0	1.080	-0.590				0.104	0.379
GLI3	0	-0.980	1.650
AMBRA1	0	1.670	-0.450	-1.226				-2.109
WNT5A	0
HES1	0	-0.940	0.860
PROX1	0	0.800	-0.550
ALDH1A2	0	-1.010	0.740
EPHA2	0	1.330	-0.460					0.221
TCF7L2	0	-0.550	0.790	-0.741
SALL2	0	0.260	-0.270	-0.080	0.063	0.213	0.247	0.009
SALL2	0	0.260	-0.270	-1.479			-1.326	-0.737
C2CD3	0	-0.390	-0.010
NF1	0	1.000	-0.500				0.444	-0.190
ZNF358	0	-0.260	1.180

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ALDH1A2	Ubiquitylation	K365		-1.744	_VVGSPFDPTTEQGPQIDK(gl)K_
ALDH1A2	Ubiquitylation	K366		-1.744	_VVGSPFDPTTEQGPQIDK(gl)K_
ALDH1A2	Ubiquitylation	K507		0.123	_EYSEVK(gl)TVTVK_
AMBRA1	Ubiquitylation	K175	-0.373	0.447	_REPFAVVK(gl)TASEMER_
C2CD3	Ubiquitylation	K86	-0.837		_DALQTEPK(gl)AVR_
C2CD3	Phosphorylation	S2111	-1.046	-1.043	_EGPS(ph)CPSPGPFCR_
C2CD3	Phosphorylation	S2114		-1.200	_EGPSCPS(ph)PGPFCR_
EPHA2	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHA2	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHA2	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHA2	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHA2	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHA2	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
FKBP8	Ubiquitylation	K217	-0.362	-0.356	_VK(gl)CLNNLAASQLK_
FKBP8	Ubiquitylation	K258		-0.292	_GK(gl)VLAQQGEYSEAIPILR_
FKBP8	Ubiquitylation	K278	-1.013	-0.590	_AALK(gl)LEPSNK_
FKBP8	Ubiquitylation	K284	-0.086		_LEPSNK(gl)TIHAELSK_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
HES1	Ubiquitylation	K66		0.212	_TLILDALK(gl)K_
HES1	Ubiquitylation	K67		0.212	_TLILDALK(gl)K_
HES1	Ubiquitylation	K109	-0.891		_AQMTAALSTDPSVLGK(gl)YR_
LRP6	Ubiquitylation	K1443		-0.221	_GK(gl)SMISSLSIMGGSSGPPYDR_
NF1	Ubiquitylation	K471		0.218	_MAPSLTFKEK(gl)_
NF1	Phosphorylation	S864		-0.458	_SNSGLATYS(ph)PPMGPVSER_
NF1	Phosphorylation	T2514		0.076	_GSEGYLAATYPTVGQT(ph)SPR_
NF1	Phosphorylation	S2515	0.071	0.316	_GSEGYLAATYPTVGQTS(ph)PR_
NF1	Phosphorylation	S2543	0.698	0.655	_S(ph)FDHLISDTK_
PHGDH	Ubiquitylation	K21	0.211	0.538	_K(gl)ILQDGGLQVVEK_
PHGDH	Ubiquitylation	K58	-0.078	0.489	_SATK(gl)VTADVINAAEK_
PHGDH	Ubiquitylation	K69	0.277	0.839	_VTADVINAAEK(gl)LQVVGR_
PHGDH	Ubiquitylation	K289	-0.629	-0.819	_ALVDHENVISCPHLGASTK(gl)EAQSR_
PHGDH	Ubiquitylation	K351	-0.346	0.413	_AWAGSPK(gl)GTIQVITQGTSLK_
PHGDH	Ubiquitylation	K384	-0.129	-0.044	_EASK(gl)QADVNLVNAK_
PHGDH	Ubiquitylation	K394	-0.043		_QADVNLVNAK(gl)LLVK_
PKD1	Phosphorylation	T867		0.841	_GT(ph)YHVRLEVNNTVSGAAAQADVR_
PLOD3	Ubiquitylation	K215		1.464	_LSLNLDHK(gl)SR_
PLXNA2	Ubiquitylation	K1272	0.103		_ENDLTLK(gl)R_
PROX1	Phosphorylation	S511	0.460	0.502	_DRAS(ph)PESLDLTR_
SALL1	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
SALL2	Ubiquitylation	K515	-1.115		_FVLMK(gl)AVEPK_
SALL2	Ubiquitylation	K522	-1.318	-1.842	_NK(gl)ADENTPPGSEGSAISGVAESSTATR_
SALL2	Ubiquitylation	K598	0.186	-0.445	_LQQLVEK(gl)IDR_
SALL2	Phosphorylation	S802	0.187	0.081	_GDS(ph)EEASGAEEEVGTVAAAATAGK_
SALL2	Phosphorylation	S806	0.101	0.212	_GDSEEAS(ph)GAEEEVGTVAAAATAGK_
SALL2	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
SALL4	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
TCF7	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
TCF7L2	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_
ZNF358	Phosphorylation	S146	-1.729		_VDPISSGLTATPQVLATSPAVLPAPAS(ph)PPRPFSCPDCGR_
ZNF358	Phosphorylation	S152		-0.863	_VDPISSGLTATPQVLATSPAVLPAPASPPRPFS(ph)CPDCGR_