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Query: SALL1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SALL1 0 -1.939 -0.080 0.063 0.213 0.247 0.009

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SALL1 Phosphorylation S1119 -1.156 -1.235 _DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_

Background Information for SALL1:


Pubmed-SALL1 »
Uniprot-SALL1 »
Biogrid-SALL1 »
ProteomicsDB-SALL1 »

Tumorportal-SALL1 »
COSMIC-SALL1 »
GenomeRNAi-SALL1 »
Genecards-SALL1


Protein-protein Interactions for SALL1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DSN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HPS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBBP7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SALL1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_C2H2-like IPR015880 1.29
Category members Znf_C2H2 IPR007087 0.92


Protein complexes (CORUM database) featuring SALL1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SALL1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0000792 heterochromatin Database 5.45
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0016581 NuRD complex Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0030325 adrenal gland development Database 0.52
Category members GO Category GO:0008013 beta-catenin binding Database 0.35
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0048566 embryonic digestive tract development Database 0.24
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members GO Category GO:0008406 gonad development Database 0.06
Category members GO Category GO:0021772 olfactory bulb development Database 0.06
Category members GO Category GO:0021915 neural tube development Database 0.03
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members GO Category GO:0001657 ureteric bud development Database 0
Category members GO Category GO:0001658 branching involved in ureteric bud morphogenesis Database 0
Category members GO Category GO:0001822 kidney development Database 0
Category members GO Category GO:0001843 neural tube closure Database 0
Category members GO Category GO:0003281 ventricular septum development Database 0
Category members GO Category GO:0003337 mesenchymal to epithelial transition involved in metanephros morphogenesis Database 0
Category members GO Category GO:0004407 histone deacetylase activity Database 0
Category members GO Category GO:0007507 heart development Database 0
Category members GO Category GO:0010369 chromocenter Database 0
Category members GO Category GO:0016575 histone deacetylation Database 0
Category members GO Category GO:0021553 olfactory nerve development Database 0
Category members GO Category GO:0021889 olfactory bulb interneuron differentiation Database 0
Category members GO Category GO:0021983 pituitary gland development Database 0
Category members GO Category GO:0030177 positive regulation of Wnt signaling pathway Database 0
Category members GO Category GO:0035136 forelimb morphogenesis Database 0
Category members GO Category GO:0035137 hindlimb morphogenesis Database 0
Category members GO Category GO:0042473 outer ear morphogenesis Database 0
Category members GO Category GO:0042733 embryonic digit morphogenesis Database 0
Category members GO Category GO:0045666 positive regulation of neuron differentiation Database 0
Category members GO Category GO:0045879 negative regulation of smoothened signaling pathway Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0060173 limb development Database 0
Category members GO Category GO:0061034 olfactory bulb mitral cell layer development Database 0


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