RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
FGFR3	0	-1.120	1.390
SALL1	0			-0.080	0.063	0.213	0.247	0.009
GLI3	0	-0.980	1.650
SUFU	0	1.190	-0.990
RUNX2	0
RB1	0	1.180	-1.070		0.429	0.755
RB1	0	1.180	-1.070
IFT122	0	0.590	-0.240
IFT122	0	1.590	-0.690
BTRC	0	-0.780	0.690	0.532			-1.791	0.313
KIF7	0	-0.700	0.600				0.688
KIF7	0	0.280	-0.500				0.688
PTCH1	0	0.630	-0.690
SALL3	0			-0.080	0.063	0.213	0.247	0.009

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BTRC	Ubiquitylation	K466		0.325	_IVSGAYDGKIK(gl)_
FGFR3	Ubiquitylation	K205		-0.115	_IGGIK(gl)LR_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
IFT122	Ubiquitylation	K804		-0.101	_MLITK(gl)QADWAR_
IFT122	Ubiquitylation	K1084	-0.071		_FQK(gl)SIELGTLTIR_
KIF7	Ubiquitylation	K1208		0.476	_YMWINQELK(gl)QK_
PTCH1	Ubiquitylation	K904		-0.390	_DKPIDISQLTK(gl)QR_
RB1	Phosphorylation	S69	-3.602	-3.397	_TAATAAAAAAEPPAPPPPPPPEEDPEQDS(ph)GPEDLPLVR_
RB1	Ubiquitylation	K97	-0.546		_LK(gl)IPDHVR_
RB1	Phosphorylation	T388	0.005	0.116	_TLQTDSIDSFETQRT(ph)PR_
RB1	Phosphorylation	T405	-0.851	-0.901	_KSNLDEEVNVIPPHT(ph)PVR_
RB1	Phosphorylation	S820		-0.019	_S(ph)PYKFPSSPLR_
RB1	Ubiquitylation	K823	-2.214		_SPYK(gl)FPSSPLR_
RB1	Phosphorylation	S827	0.824	0.111	_FPSS(ph)PLR_
RB1	Phosphorylation	S839	-0.701	-1.045	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K842		-0.751	_IPGGNIYISPLK(gl)SPYK_
RB1	Phosphorylation	S843	-0.701	-0.022	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K846	-2.084		_SPYK(gl)ISEGLPTPTK_
RB1	Phosphorylation	T853	0.039	-0.555	_ISEGLPT(ph)PTKM(ox)T(ph)PR_
RB1	Ubiquitylation	K856	-1.350		_ISEGLPTPTK(gl)MTPR_
RB1	Phosphorylation	T858	-0.782	0.564	_ISEGLPT(ph)PTKMT(ph)PR_
RB1	Ubiquitylation	K879	-0.187		_FQK(gl)INQMVCNSDR_
RUNX2	Phosphorylation	S96	0.504	-0.399	_RFS(ph)PPSSSLQPGK_
RUNX2	Ubiquitylation	K244	0.258		_NASAVMK(gl)NQVAR_
SALL1	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
SALL3	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
SUFU	Ubiquitylation	K303	-0.015		_RLSGK(gl)DTEQIR_
SUFU	Ubiquitylation	K321	-1.917	-1.398	_GLEINSK(gl)PVLPPINPQR_
SUFU	Phosphorylation	S346	0.344	0.498	_KDS(ph)LESDSSTAIIPHELIR_