RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PAM	1	0.410	-0.620
FGFR1	0	0.210	0.150
SALL1	0			-0.080	0.063	0.213	0.247	0.009
GLI3	0	-0.980	1.650
BBS7	0
KIAA1715	0	1.780	-1.030				-0.197	-0.120
IFT122	0	0.590	-0.240
IFT122	0	1.590	-0.690
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
CHD7	0	0.220	-0.050	-1.168			0.026	0.297
NR2F2	0	-1.120	1.260	-1.119	0.136	0.670
NR2F2	0	-1.120	1.260		0.225	0.992	0.424	0.474

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BBS7	Ubiquitylation	K59		-1.507	_KGEAAAVFK(gl)TLPGPK_
BBS7	Ubiquitylation	K479		-0.952	_IQPK(gl)TCQVR_
BBS7	Ubiquitylation	K685		-0.505	_FK(gl)GTNVK_
CHD7	Phosphorylation	S557		-0.452	_VPVHQHS(ph)PSEPFLEKPVPDM(ox)TQVSGPNAQLVK_
CHD7	Phosphorylation	S1874	-0.088	-0.155	_TPFKDEIDEFANS(ph)PSEDKEESMEIHATGK_
CHD7	Phosphorylation	S2533		-0.792	_RTS(ph)LSAEDAEVTK_
CHD7	Phosphorylation	S2559	-0.345	-0.513	_NIPS(ph)PGQLDPDTR_
CHD7	Phosphorylation	S2956	0.383	-0.248	_DGETLEGS(ph)DAEESLDK_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
FGFR1	Ubiquitylation	K510	1.047	-0.221	_VTK(gl)VAVK_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
IFT122	Ubiquitylation	K804		-0.101	_MLITK(gl)QADWAR_
IFT122	Ubiquitylation	K1084	-0.071		_FQK(gl)SIELGTLTIR_
KIAA1715	Ubiquitylation	K113	-0.913	0.570	_NNEALDDLK(gl)SQR_
KIAA1715	Ubiquitylation	K130	0.026		_ILEEVMEKETYK(gl)TAK_
KIAA1715	Ubiquitylation	K133	-0.022		_TAK(gl)LILER_
KIAA1715	Phosphorylation	S177	-1.411	-2.603	_NLS(ph)PTPASPNQGPPPQVPVSPGPPK_
KIAA1715	Ubiquitylation	K355	-0.881		_LPEFSFEK(gl)R_
NR2F2	Ubiquitylation	K362		0.144	_FGK(gl)LLLR_
NR2F2	Ubiquitylation	K389	-0.473	-0.156	_LVGK(gl)TPIETLIR_
PAM	Ubiquitylation	K716		-1.381	_TDTK(gl)EFVR_
PAM	Phosphorylation	S918	0.585	1.654	_GKGS(ph)GGLNLGNFFASR_
SALL1	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_