bioLOGIC-db

bioLOGIC Data

Query: SALL2

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
SALL2	0	0.593	0.260	-0.270	-1.479			-1.326	-0.737
SALL2	0	0.593	0.260	-0.270	-0.080	0.063	0.213	0.247	0.009

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
SALL2	Phosphorylation	S806	0.101	0.212	_GDSEEAS(ph)GAEEEVGTVAAAATAGK_
SALL2	Phosphorylation	S802	0.187	0.081	_GDS(ph)EEASGAEEEVGTVAAAATAGK_
SALL2	Ubiquitylation	K598	0.186	-0.445	_LQQLVEK(gl)IDR_
SALL2	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
SALL2	Ubiquitylation	K522	-1.318	-1.842	_NK(gl)ADENTPPGSEGSAISGVAESSTATR_
SALL2	Ubiquitylation	K515	-1.115		_FVLMK(gl)AVEPK_

ProteomicsDB-SALL2 »

Protein-protein Interactions for SALL2

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait ASB3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ASB7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CARD8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CDC16	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DSN1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HPS1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait L3MBTL1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LHX6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NCAPH2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PRMT2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PSME3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RCCD1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RFPL4B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SALL2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZC3HC1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in SALL2

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	Znf_C2H2-like	IPR015880	1.29
Category members	Znf_C2H2	IPR007087	0.92

Protein complexes (CORUM database) featuring SALL2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring SALL2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0003677	DNA binding	Database	1.53
Category members	GO Category	GO:0045892	negative regulation of transcription, DNA-dependent	Database	1.15
Category members	GO Category	GO:0016581	NuRD complex	Database	1.15
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	GO Category	GO:0003676	nucleic acid binding	Database	0.83
Category members	GO Category	GO:0003700	sequence-specific DNA binding transcription factor activity	Database	0.63
Category members	GO Category	GO:0021915	neural tube development	Database	0.03
Category members	GO Category	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Database	0.02
Category members	GO Category	GO:0006355	regulation of transcription, DNA-dependent	Database	0
Category members	GO Category	GO:0046872	metal ion binding	Database	0