bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
phototransduction, visible light
(GO:0007603)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
METAP2 1 0.200 -0.960 -1.520 -1.105
CALM2 1 -0.690 0.700 1.911
CALM2 1 -0.690 0.700 0.877 -4.680
CALM3 1 -0.190 0.120 1.911
CALM3 1 -0.190 0.120 0.877 -4.680
SDC2 1 -1.780 3.110
CALM1 1 -0.440 0.360 1.911
CALM1 1 -0.440 0.360 0.877 -4.680
PRKCQ 0 0.410 0.020
RDH11 0 -0.890 1.970 -0.090 0.239 0.645
GNB1 0 -0.700 0.650 0.713 0.504 0.538
GNB3 0 -1.020 1.280 0.713 0.504 0.538
APOB 0 0.130 0.050 -4.359 0.702
GNAT1 0 -0.110 -0.270
GNAT1 0 -0.110 -0.270 -0.166 -0.094 0.032 0.420 0.504
APOA1 0 0.850 -0.420 -3.959
LRP1 0 -0.360 0.400 1.199 1.016
SDC4 0 1.110 -0.650
LDLR 0 0.610 -0.680 -0.328
NMT1 0 0.720 -0.230 -0.429 -0.490
NMT2 0 1.220 -0.530 -0.429 -0.490
PRKCA 0 0.750 -0.690 0.349 0.585
PRKCA 0 0.750 -0.690
DHRS3 0 0.800 -0.900
METAP1 0 0.150 -0.280 0.170 -0.316
FNTA 0 -0.510 1.370
AGRN 0 -0.130 0.060 -0.939
FNTB 0

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CALM1 Ubiquitylation K78 0.061 _DGDGTITTK(gl)ELGTVMR_
CALM1 Ubiquitylation K142 0.922 _VFDK(gl)DGNGYISAAELR_
CALM2 Ubiquitylation K78 0.061 _DGDGTITTK(gl)ELGTVMR_
CALM2 Ubiquitylation K142 0.922 _VFDK(gl)DGNGYISAAELR_
CALM3 Ubiquitylation K78 0.061 _DGDGTITTK(gl)ELGTVMR_
CALM3 Ubiquitylation K142 0.922 _VFDK(gl)DGNGYISAAELR_
DHRS3 Ubiquitylation K299 -0.098 0.200 _FSGTYTCMNTFK(gl)GR_
FNTA Ubiquitylation K220 -0.209 0.025 _VLLK(gl)SLQK_
FNTB Phosphorylation S3 -0.680 -0.936 _(ac)AS(ph)PSSFTYYCPPSSSPVWSEPLYSLRPEHAR_
GNAT1 Ubiquitylation K17 0.320 _ELEK(gl)KLK_
GNAT1 Ubiquitylation K18 0.320 _ELEK(gl)KLK_
GNB1 Ubiquitylation K23 -0.282 _K(gl)ACADATLSQITNNIDPVGR_
GNB1 Ubiquitylation K209 -0.296 -0.249 _LFVSGACDASAK(gl)LWDVR_
GNB3 Ubiquitylation K23 -0.282 _K(gl)ACADATLSQITNNIDPVGR_
GNB3 Ubiquitylation K209 -0.296 -0.249 _LFVSGACDASAK(gl)LWDVR_
LRP1 Ubiquitylation K4527 -0.315 _HSLASTDEK(gl)R_
METAP2 Ubiquitylation K281 -0.346 _AVK(gl)DATNTGIK_
METAP2 Ubiquitylation K289 -0.679 0.423 _DATNTGIK(gl)CAGIDVR_
METAP2 Ubiquitylation K323 0.948 _TYQVK(gl)PIR_
METAP2 Ubiquitylation K427 -0.662 1.802 _LGESK(gl)YLMALK_
NMT1 Phosphorylation S47 0.118 0.184 _GGLS(ph)PANDTGAK_
NMT2 Phosphorylation S47 0.118 0.184 _GGLS(ph)PANDTGAK_
PRKCA Phosphorylation S10 -0.650 0.036 _(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCA Phosphorylation S13 -1.038 0.335 _(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCA Phosphorylation S226 0.693 0.415 _STLNPQWNES(ph)FTFK_
PRKCA Ubiquitylation K316 -0.522 -0.535 _LGPAGNK(gl)VISPSEDR_
PRKCQ Phosphorylation S685 0.911 _ALINS(ph)MDQNMFR_
RDH11 Ubiquitylation K59 0.043 _ETAK(gl)ELAQR_
RDH11 Ubiquitylation K105 -0.155 -0.010 _KLDLSDTK(gl)SIR_
RDH11 Ubiquitylation K112 -0.559 0.363 _AFAK(gl)GFLAEEK_
SDC2 Ubiquitylation K193 -0.696 -0.929 _KPSSAAYQK(gl)APTK_
SDC2 Ubiquitylation K197 -0.160 0.647 _APTK(gl)EFYA_
SDC4 Ubiquitylation K190 -0.979 _K(gl)APTNEFYA_


© Copyright Svejstrup Laboratory 2015