bioLOGIC Category
Results for the Category
phototransduction, visible light
(GO:0007603)
RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
W |
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|
Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
METAP2
|
1
|
0.200
|
-0.960
|
|
|
|
-1.520
|
-1.105
|
CALM2
|
1
|
-0.690
|
0.700
|
|
1.911
|
|
|
|
CALM2
|
1
|
-0.690
|
0.700
|
|
|
|
0.877
|
-4.680
|
CALM3
|
1
|
-0.190
|
0.120
|
|
1.911
|
|
|
|
CALM3
|
1
|
-0.190
|
0.120
|
|
|
|
0.877
|
-4.680
|
SDC2
|
1
|
-1.780
|
3.110
|
|
|
|
|
|
CALM1
|
1
|
-0.440
|
0.360
|
|
1.911
|
|
|
|
CALM1
|
1
|
-0.440
|
0.360
|
|
|
|
0.877
|
-4.680
|
PRKCQ
|
0
|
0.410
|
0.020
|
|
|
|
|
|
RDH11
|
0
|
-0.890
|
1.970
|
-0.090
|
|
|
0.239
|
0.645
|
GNB1
|
0
|
-0.700
|
0.650
|
0.713
|
|
|
0.504
|
0.538
|
GNB3
|
0
|
-1.020
|
1.280
|
0.713
|
|
|
0.504
|
0.538
|
APOB
|
0
|
0.130
|
0.050
|
|
|
|
-4.359
|
0.702
|
GNAT1
|
0
|
-0.110
|
-0.270
|
|
|
|
|
|
GNAT1
|
0
|
-0.110
|
-0.270
|
-0.166
|
-0.094
|
0.032
|
0.420
|
0.504
|
APOA1
|
0
|
0.850
|
-0.420
|
|
|
|
-3.959
|
|
LRP1
|
0
|
-0.360
|
0.400
|
|
|
|
1.199
|
1.016
|
SDC4
|
0
|
1.110
|
-0.650
|
|
|
|
|
|
LDLR
|
0
|
0.610
|
-0.680
|
|
|
|
|
-0.328
|
NMT1
|
0
|
0.720
|
-0.230
|
|
|
|
-0.429
|
-0.490
|
NMT2
|
0
|
1.220
|
-0.530
|
|
|
|
-0.429
|
-0.490
|
PRKCA
|
0
|
0.750
|
-0.690
|
|
|
|
0.349
|
0.585
|
PRKCA
|
0
|
0.750
|
-0.690
|
|
|
|
|
|
DHRS3
|
0
|
0.800
|
-0.900
|
|
|
|
|
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METAP1
|
0
|
0.150
|
-0.280
|
|
|
|
0.170
|
-0.316
|
FNTA
|
0
|
-0.510
|
1.370
|
|
|
|
|
|
AGRN
|
0
|
-0.130
|
0.060
|
|
|
|
-0.939
|
|
FNTB
|
0
|
|
|
|
|
|
|
|
Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
CALM1
|
Ubiquitylation
|
K78
|
0.061
|
|
_DGDGTITTK(gl)ELGTVMR_
|
CALM1
|
Ubiquitylation
|
K142
|
|
0.922
|
_VFDK(gl)DGNGYISAAELR_
|
CALM2
|
Ubiquitylation
|
K78
|
0.061
|
|
_DGDGTITTK(gl)ELGTVMR_
|
CALM2
|
Ubiquitylation
|
K142
|
|
0.922
|
_VFDK(gl)DGNGYISAAELR_
|
CALM3
|
Ubiquitylation
|
K78
|
0.061
|
|
_DGDGTITTK(gl)ELGTVMR_
|
CALM3
|
Ubiquitylation
|
K142
|
|
0.922
|
_VFDK(gl)DGNGYISAAELR_
|
DHRS3
|
Ubiquitylation
|
K299
|
-0.098
|
0.200
|
_FSGTYTCMNTFK(gl)GR_
|
FNTA
|
Ubiquitylation
|
K220
|
-0.209
|
0.025
|
_VLLK(gl)SLQK_
|
FNTB
|
Phosphorylation
|
S3
|
-0.680
|
-0.936
|
_(ac)AS(ph)PSSFTYYCPPSSSPVWSEPLYSLRPEHAR_
|
GNAT1
|
Ubiquitylation
|
K17
|
0.320
|
|
_ELEK(gl)KLK_
|
GNAT1
|
Ubiquitylation
|
K18
|
0.320
|
|
_ELEK(gl)KLK_
|
GNB1
|
Ubiquitylation
|
K23
|
-0.282
|
|
_K(gl)ACADATLSQITNNIDPVGR_
|
GNB1
|
Ubiquitylation
|
K209
|
-0.296
|
-0.249
|
_LFVSGACDASAK(gl)LWDVR_
|
GNB3
|
Ubiquitylation
|
K23
|
-0.282
|
|
_K(gl)ACADATLSQITNNIDPVGR_
|
GNB3
|
Ubiquitylation
|
K209
|
-0.296
|
-0.249
|
_LFVSGACDASAK(gl)LWDVR_
|
LRP1
|
Ubiquitylation
|
K4527
|
-0.315
|
|
_HSLASTDEK(gl)R_
|
METAP2
|
Ubiquitylation
|
K281
|
|
-0.346
|
_AVK(gl)DATNTGIK_
|
METAP2
|
Ubiquitylation
|
K289
|
-0.679
|
0.423
|
_DATNTGIK(gl)CAGIDVR_
|
METAP2
|
Ubiquitylation
|
K323
|
|
0.948
|
_TYQVK(gl)PIR_
|
METAP2
|
Ubiquitylation
|
K427
|
-0.662
|
1.802
|
_LGESK(gl)YLMALK_
|
NMT1
|
Phosphorylation
|
S47
|
0.118
|
0.184
|
_GGLS(ph)PANDTGAK_
|
NMT2
|
Phosphorylation
|
S47
|
0.118
|
0.184
|
_GGLS(ph)PANDTGAK_
|
PRKCA
|
Phosphorylation
|
S10
|
-0.650
|
0.036
|
_(ac)ADVFPGNDS(ph)TASQDVANR_
|
PRKCA
|
Phosphorylation
|
S13
|
-1.038
|
0.335
|
_(ac)ADVFPGNDSTAS(ph)QDVANR_
|
PRKCA
|
Phosphorylation
|
S226
|
0.693
|
0.415
|
_STLNPQWNES(ph)FTFK_
|
PRKCA
|
Ubiquitylation
|
K316
|
-0.522
|
-0.535
|
_LGPAGNK(gl)VISPSEDR_
|
PRKCQ
|
Phosphorylation
|
S685
|
|
0.911
|
_ALINS(ph)MDQNMFR_
|
RDH11
|
Ubiquitylation
|
K59
|
|
0.043
|
_ETAK(gl)ELAQR_
|
RDH11
|
Ubiquitylation
|
K105
|
-0.155
|
-0.010
|
_KLDLSDTK(gl)SIR_
|
RDH11
|
Ubiquitylation
|
K112
|
-0.559
|
0.363
|
_AFAK(gl)GFLAEEK_
|
SDC2
|
Ubiquitylation
|
K193
|
-0.696
|
-0.929
|
_KPSSAAYQK(gl)APTK_
|
SDC2
|
Ubiquitylation
|
K197
|
-0.160
|
0.647
|
_APTK(gl)EFYA_
|
SDC4
|
Ubiquitylation
|
K190
|
-0.979
|
|
_K(gl)APTNEFYA_
|
© Copyright Svejstrup Laboratory 2015