bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: FNTB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FNTB 0 -1.616

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FNTB Phosphorylation S3 -0.680 -0.936 _(ac)AS(ph)PSSFTYYCPPSSSPVWSEPLYSLRPEHAR_

Background Information for FNTB:


Pubmed-FNTB »
Uniprot-FNTB »
Biogrid-FNTB »
ProteomicsDB-FNTB »

Tumorportal-FNTB »
COSMIC-FNTB »
GenomeRNAi-FNTB »
Genecards-FNTB


Protein-protein Interactions for FNTB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARFGAP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ARNT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AUP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AURKAIP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AVP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C10orf71 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C11orf48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CAPN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CAPN8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CPA6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DCAF7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM117B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM131B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM53C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FNTB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GLYR1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait INTU Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPS11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NAP1L1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRPSAP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPL18 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TP53TG5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in FNTB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Terpenoid_cyclase/PrenylTrfase IPR008930 0.04
Category members Prenyltrans IPR001330 0


Protein complexes (CORUM database) featuring FNTB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 419 Farnesyltransferase Database 0


Categories featuring FNTB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0043234 protein complex Database 2.73
Category members GO Category GO:0007275 multicellular organismal development Database 0.31
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0008285 negative regulation of cell proliferation Database 0.28
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0007603 phototransduction, visible light Database 0.25
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0016740 transferase activity Database 0.07
Category members GO Category GO:0042127 regulation of cell proliferation Database 0.06
Category members GO Category GO:0048146 positive regulation of fibroblast proliferation Database 0.05
Category members GO Category GO:0045787 positive regulation of cell cycle Database 0.04
Category members GO Category GO:0016056 rhodopsin mediated signaling pathway Database 0.04
Category members GO Category GO:0051770 positive regulation of nitric-oxide synthase biosynthetic process Database 0.01
Category members GO Category GO:0022400 regulation of rhodopsin mediated signaling pathway Database 0
Category members GO Category GO:0005875 microtubule associated complex Database 0
Category members GO Category GO:0004311 farnesyltranstransferase activity Database 0
Category members GO Category GO:0004660 protein farnesyltransferase activity Database 0
Category members GO Category GO:0005965 protein farnesyltransferase complex Database 0
Category members GO Category GO:0008284 positive regulation of cell proliferation Database 0
Category members GO Category GO:0010035 response to inorganic substance Database 0
Category members GO Category GO:0014070 response to organic cyclic compound Database 0
Category members GO Category GO:0018343 protein farnesylation Database 0
Category members GO Category GO:0034097 response to cytokine Database 0
Category members GO Category GO:0042060 wound healing Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015