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RNA splicing, via transesterification reactions
(GO:0000375)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
SCAF11 2 0.150 -0.090 1.759 0.952 1.247 0.376 0.468
PRPF8 2 0.601 -0.444 0.045 -0.568 -0.007
SRSF12 2 1.580 -1.250 0.111 -0.769 0.355 0.430 0.359
SF3B3 2 -2.590 5.210 0.333 -0.136 0.248 -0.316 0.030
KHSRP 1 0.130 -0.080 -1.346 -0.756 -1.217 -1.712 -0.497
PRPF6 1 -1.220 1.930 -0.538 -0.333 0.350 0.139 0.304
MPHOSPH10 1 2.270 -0.930 -0.405 -0.008
SRRM1 1 0.510 -1.020 -2.536 -0.548 -0.106
DBR1 1 2.630 -0.720
TXNL4A 1 -1.870 3.440
DDX23 1 0.090 -0.140
DDX23 1 0.090 -0.140 0.001 -0.214 0.377 0.541 0.355
SNRNP40 0 0.200 0.070 -1.088 -0.555 -0.079 -1.145 -0.242
SNRNP40 0 0.200 0.070
GEMIN2 0 0.620 -0.610
SF3B1 0 0.308 -0.445 -0.096 -0.608 -0.188
SRSF4 0 -0.950 1.920 0.189 -1.074 0.320 0.240 0.525
BCAS2 0 -0.409 -0.496 -0.111
SMNDC1 0 0.060 -0.120 -0.870 -0.139 -0.838 -0.317
WDR83 0 -1.020 1.070
TRA2B 0 0.620 -0.400 0.394 0.079 0.463 0.352 0.209
PRPF4 0 0.390 0.440 0.215 -0.366 -0.177 -0.209 0.292
SLU7 0 -1.400 2.470 -1.690 -1.547 -0.162
SF3A3 0 0.259 -0.407 0.363

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
BCAS2 Ubiquitylation K85 1.142 _QPIELLSMK(gl)R_
BCAS2 Ubiquitylation K177 -1.074 _NMQLTAGSK(gl)LR_
DBR1 Ubiquitylation K250 1.030 _ATK(gl)FLALDK_
DBR1 Phosphorylation S514 0.440 _RLS(ph)DEHEPEQR_
DDX23 Ubiquitylation K259 1.705 1.364 _YLGGIK(gl)K_
DDX23 Ubiquitylation K260 1.705 1.364 _YLGGIK(gl)K_
DDX23 Ubiquitylation K326 -0.482 _FYGDLMEK(gl)R_
GEMIN2 Phosphorylation S81 -0.444 _KQS(ph)VNISLSGCQPAPEGYSPTLQWQQQQVAQFSTVR_
KHSRP Phosphorylation T100 0.619 _IGGDAATTVNNST(ph)PDFGFGGQK_
KHSRP Ubiquitylation K109 -0.384 0.232 _IGGDAATTVNNSTPDFGFGGQK(gl)R_
KHSRP Ubiquitylation K122 -0.502 -1.429 _QLEDGDQPESKK(gl)_
KHSRP Phosphorylation S125 1.265 1.949 _KLAS(ph)QGDSISSQLGPIHPPPR_
KHSRP Ubiquitylation K169 0.608 _GGEQINK(gl)IQQDSGCK_
KHSRP Ubiquitylation K177 -0.480 -0.130 _IQQDSGCK(gl)VQISPDSGGLPER_
KHSRP Phosphorylation S181 0.331 0.424 _VQIS(ph)PDSGGLPER_
KHSRP Ubiquitylation K203 0.612 _SVSLTGAPESVQK(gl)AK_
KHSRP Ubiquitylation K205 0.356 _SVSLTGAPESVQKAK(gl)_
KHSRP Ubiquitylation K251 0.622 1.298 _AGLVIGK(gl)GGETIK_
KHSRP Ubiquitylation K257 0.850 1.240 _GGETIK(gl)QLQER_
KHSRP Phosphorylation S274 -0.095 1.644 _MILIQDGS(ph)QNTNVDKPLR_
KHSRP Phosphorylation T277 0.126 1.450 _MILIQDGSQNT(ph)NVDKPLR_
KHSRP Ubiquitylation K359 -0.109 _IQFK(gl)QDDGTGPEK_
KHSRP Phosphorylation S480 0.929 -0.004 _LFIIRGS(ph)PQQIDHAK_
KHSRP Ubiquitylation K628 0.007 0.744 _K(gl)IGQQPQQPGAPPQQDYTK_
PRPF6 Ubiquitylation K146 -2.280 _IQQQFSDLK(gl)R_
PRPF6 Ubiquitylation K585 0.925 0.567 _AAYFEK(gl)NHGTR_
PRPF6 Ubiquitylation K618 3.222 1.333 _AEVLWLMGAKSK(gl)_
PRPF6 Ubiquitylation K680 0.476 _VFMK(gl)SVK_
PRPF6 Ubiquitylation K737 0.526 _EAYNQGLK(gl)K_
PRPF6 Ubiquitylation K738 -0.238 _EAYNQGLKK(gl)_
PRPF8 Ubiquitylation K36 1.198 _K(gl)WQQLQAK_
PRPF8 Ubiquitylation K218 0.783 _K(gl)YVNGSTYQR_
PRPF8 Ubiquitylation K442 -0.412 -0.328 _EHCPAGQPVK(gl)VR_
PRPF8 Ubiquitylation K449 0.961 _VSYQK(gl)LLK_
PRPF8 Ubiquitylation K785 1.193 0.381 _LYLK(gl)AEQER_
PRPF8 Ubiquitylation K847 4.280 4.737 _LK(gl)EAYSVK_
PRPF8 Ubiquitylation K853 0.313 0.906 _EAYSVK(gl)SR_
PRPF8 Ubiquitylation K1131 -0.581 _YLTEHPDPNNENIVGYNNK(gl)K_
PRPF8 Ubiquitylation K1132 -0.621 _YLTEHPDPNNENIVGYNNKK(gl)_
PRPF8 Ubiquitylation K1144 1.075 0.092 _LMK(gl)HDVNLGR_
PRPF8 Ubiquitylation K1158 0.553 _AVFWDIK(gl)NR_
PRPF8 Ubiquitylation K1300 1.721 _IK(gl)IGLNSK_
PRPF8 Ubiquitylation K1344 0.647 _WSK(gl)QTDVGITHFR_
PRPF8 Ubiquitylation K1392 0.488 0.214 _VWAEYALK(gl)R_
PRPF8 Ubiquitylation K1443 0.849 0.161 _TDFK(gl)QYQVLK_
PRPF8 Ubiquitylation K1735 0.067 _IMK(gl)ANPALYVLR_
PRPF8 Ubiquitylation K1859 -0.720 _SLPVEEQPK(gl)QIIVTR_
PRPF8 Ubiquitylation K1993 0.886 -0.521 _DLILADYGK(gl)K_
PRPF8 Ubiquitylation K1994 0.886 -0.521 _DLILADYGK(gl)K_
PRPF8 Ubiquitylation K2031 0.976 _QQIAEIEK(gl)QTK_
PRPF8 Ubiquitylation K2034 0.488 0.601 _QTK(gl)EQSQLTATQTR_
PRPF8 Ubiquitylation K2140 -0.848 _AQIAGYLYGVSPPDNPQVK(gl)EIR_
SCAF11 Ubiquitylation K120 -0.349 _NENSFEK(gl)QVSCHENSK_
SCAF11 Ubiquitylation K146 0.229 _EDLLSAK(gl)VCDLK_
SCAF11 Ubiquitylation K151 -2.294 _VCDLK(gl)WIHR_
SCAF11 Ubiquitylation K165 -0.943 _NSLYSETGGK(gl)K_
SCAF11 Ubiquitylation K166 -0.834 _NSLYSETGGK(gl)K_
SCAF11 Ubiquitylation K171 -1.977 -1.385 _NAAIK(gl)INKPQR_
SCAF11 Ubiquitylation K299 -2.071 _GYALAHTQEGEEKK(gl)_
SCAF11 Phosphorylation S338 -0.660 -0.850 _S(ph)PISDNSGCDAPGNSNPSLSVPSSAESEK_
SCAF11 Phosphorylation S402 0.253 0.097 _SSS(ph)NDSVDEETAESDTSPVLEK_
SCAF11 Phosphorylation S405 0.301 0.301 _SSSNDS(ph)VDEETAESDTSPVLEK_
SCAF11 Phosphorylation S533 4.391 _QDQISGLS(ph)QSEVK_
SCAF11 Phosphorylation T602 0.547 0.450 _T(ph)EELIESPKLESSEGEIIQTVDR_
SCAF11 Phosphorylation S608 0.626 0.504 _TEELIES(ph)PKLESSEGEIIQTVDR_
SCAF11 Phosphorylation S613 0.576 0.654 _TEELIESPKLES(ph)SEGEIIQTVDR_
SCAF11 Phosphorylation S614 0.665 0.542 _LESS(ph)EGEIIQTVDR_
SCAF11 Ubiquitylation K676 -0.703 _NNLLNTK(gl)LEK_
SCAF11 Phosphorylation S796 0.171 _FHS(ph)PSTTWSPNK_
SCAF11 Phosphorylation S802 0.689 _FHS(ph)PSTTWS(ph)PNKDTPQEK_
SCAF11 Phosphorylation S963 -0.389 -0.222 _IDRDSYS(ph)PR_
SCAF11 Phosphorylation S1170 0.345 _NSS(ph)GPQSGWMK_
SF3A3 Ubiquitylation K153 0.414 _YINLK(gl)ASEK_
SF3A3 Ubiquitylation K201 -0.229 _VK(gl)PLQDQNELFGK_
SF3A3 Phosphorylation S295 0.125 _SLES(ph)LDTSLFAK_
SF3A3 Ubiquitylation K420 -0.387 _GPK(gl)AFQR_
SF3A3 Ubiquitylation K489 0.581 _WQPDTEEEYEDSSGNVVNK(gl)K_
SF3A3 Ubiquitylation K490 0.581 _WQPDTEEEYEDSSGNVVNK(gl)K_
SF3A3 Ubiquitylation K496 0.160 -0.491 _TYEDLK(gl)R_
SF3B1 Phosphorylation S129 -0.787 -0.713 _TMIIS(ph)PERLDPFADGGK_
SF3B1 Phosphorylation T142 -0.892 -2.157 _TMIIS(ph)PERLDPFADGGKT(ph)PDPK_
SF3B1 Phosphorylation T207 -1.127 -1.868 _WDQTADQT(ph)PGAT(ph)PK_
SF3B1 Phosphorylation T211 -0.765 -1.099 _WDQTADQT(ph)PGAT(ph)PK_
SF3B1 Phosphorylation T223 -0.989 -1.111 _LSSWDQAET(ph)PGHTPSLR_
SF3B1 Phosphorylation T227 -1.216 -0.904 _LSSWDQAETPGHT(ph)PSLR_
SF3B1 Phosphorylation T235 -1.156 _WDET(ph)PGR_
SF3B1 Phosphorylation T273 -0.351 -0.627 _GDT(ph)PGHATPGHGGATSSAR_
SF3B1 Phosphorylation T278 -0.033 -0.482 _GDTPGHAT(ph)PGHGGATSSAR_
SF3B1 Phosphorylation T303 -1.006 _TERDT(ph)PGHGSGWAETPR_
SF3B1 Phosphorylation S308 -0.512 -0.240 _DTPGHGS(ph)GWAETPRTDR_
SF3B1 Phosphorylation T313 -0.638 -0.898 _DTPGHGSGWAET(ph)PR_
SF3B1 Phosphorylation T326 -1.194 -0.893 _GGDSIGET(ph)PT(ph)PGASK_
SF3B1 Phosphorylation T328 -1.194 -1.428 _GGDSIGET(ph)PT(ph)PGASK_
SF3B1 Ubiquitylation K333 -1.360 _GGDSIGETPTPGASK(gl)R_
SF3B1 Phosphorylation S349 -0.947 _SRWDETPASQMGGS(ph)TPVLTPGK_
SF3B1 Phosphorylation T350 -0.911 -0.979 _SRWDETPASQMGGST(ph)PVLTPGK_
SF3B1 Phosphorylation T432 -1.068 -1.330 _KLT(ph)ATPTPLGGM(ox)TGFHM(ox)QTEDR_
SF3B1 Phosphorylation T434 -0.601 -1.311 _LTAT(ph)PTPLGGMTGFHMQTEDR_
SF3B1 Phosphorylation S488 0.467 -0.012 _LLVDVDESTLS(ph)PEEQKER_
SF3B1 Ubiquitylation K793 0.904 0.908 _VVK(gl)QCCGTDGVEANYIK_
SF3B1 Ubiquitylation K963 1.062 0.292 _TAVVMK(gl)TCQEEK_
SF3B1 Ubiquitylation K1014 -0.389 _MTPPIK(gl)DLLPR_
SF3B1 Ubiquitylation K1025 0.848 _LTPILK(gl)NR_
SF3B1 Ubiquitylation K1292 0.731 _IYNDDK(gl)NTYIR_
SF3B3 Ubiquitylation K101 1.551 _NM(ox)FEK(gl)IHQETFGK_
SF3B3 Ubiquitylation K109 0.083 -0.137 _IHQETFGK(gl)SGCRR_
SF3B3 Ubiquitylation K546 0.526 _TIVK(gl)CAVNQR_
SF3B3 Ubiquitylation K965 0.907 _VLIGVGK(gl)LLR_
SF3B3 Ubiquitylation K974 0.479 _VYDLGK(gl)KK_
SF3B3 Ubiquitylation K975 0.552 _VYDLGKK(gl)_
SF3B3 Ubiquitylation K1074 -1.824 _LPPNTNDEVDEDPTGNK(gl)ALWDR_
SF3B3 Ubiquitylation K1206 -1.861 _NVSEELDRTPPEVSK(gl)K_
SF3B3 Ubiquitylation K1207 -1.934 -1.861 _NVSEELDRTPPEVSKK(gl)_
SLU7 Phosphorylation S215 0.358 _LVEQANS(ph)PK_
SMNDC1 Phosphorylation S201 -0.733 -0.231 _RSIFAS(ph)PESVTGK_
SNRNP40 Ubiquitylation K18 -0.028 _KGPELPLVPVK(gl)R_
SNRNP40 Ubiquitylation K270 0.184 _VWDVRPFAPK(gl)ER_
SRRM1 Ubiquitylation K36 -0.052 _FAECLEK(gl)K_
SRRM1 Ubiquitylation K37 0.946 -0.052 _FAECLEKK(gl)_
SRRM1 Phosphorylation T220 -0.236 -0.247 _T(ph)PELPEPSVK_
SRRM1 Phosphorylation S234 0.189 0.288 _VKEPS(ph)VQEATSTSDILK_
SRRM1 Phosphorylation S260 -1.874 -1.702 _VPKPEPIPEPKEPS(ph)PEK_
SRRM1 Phosphorylation S389 0.530 -0.508 _RLS(ph)PS(ph)ASPPR_
SRRM1 Phosphorylation S391 0.670 1.010 _RLS(ph)PS(ph)ASPPR_
SRRM1 Phosphorylation S393 0.180 0.278 _RLS(ph)PSAS(ph)PPR_
SRRM1 Phosphorylation S402 -0.216 -0.477 _HRPS(ph)PPAT(ph)PPPK_
SRRM1 Phosphorylation T406 -1.669 -1.607 _HRPS(ph)PPAT(ph)PPPK_
SRRM1 Phosphorylation S448 -0.669 -0.441 _RES(ph)PSPAPKPR_
SRRM1 Phosphorylation S450 -0.294 _RESPS(ph)PAPKPR_
SRRM1 Phosphorylation S461 0.912 0.886 _KVELS(ph)ESEEDKGGK_
SRRM1 Phosphorylation S463 2.082 0.890 _KVELSES(ph)EEDKGGK_
SRRM1 Phosphorylation S550 0.523 0.207 _RWQS(ph)PVTK_
SRRM1 Phosphorylation S609 0.257 0.339 _RYS(ph)PPIQR_
SRRM1 Phosphorylation S617 -0.202 -0.195 _RYS(ph)PS(ph)PPPK_
SRRM1 Phosphorylation S619 -0.637 -0.652 _RYS(ph)PS(ph)PPPK_
SRRM1 Phosphorylation T626 -1.225 -0.870 _T(ph)AS(ph)PPPPPK_
SRRM1 Phosphorylation S628 -0.806 -0.787 _T(ph)AS(ph)PPPPPK_
SRRM1 Phosphorylation S706 -0.527 -0.615 _APQTS(ph)SSPPPVRR_
SRRM1 Phosphorylation S707 -0.548 -0.489 _APQTSS(ph)SPPPVR_
SRRM1 Phosphorylation S708 -0.506 -0.481 _APQTSSS(ph)PPPVRR_
SRRM1 Phosphorylation S725 0.842 0.451 _RQS(ph)PSPSTRPIR_
SRRM1 Phosphorylation S727 0.068 0.089 _RQSPS(ph)PSTRPIR_
SRRM1 Phosphorylation S729 0.141 -0.253 _QS(ph)PSPS(ph)TRPIRR_
SRRM1 Phosphorylation T730 -0.345 -0.119 _RQSPSPST(ph)RPIR_
SRRM1 Phosphorylation S750 0.336 0.368 _AAS(ph)PSPQSVR_
SRRM1 Phosphorylation S752 0.546 0.509 _KAAS(ph)PS(ph)PQSVR_
SRRM1 Phosphorylation S781 -1.190 -1.298 _KPPAPPS(ph)PVQSQSPSTNWSPAVPVK_
SRRM1 Phosphorylation S785 -1.558 -1.554 _KPPAPPS(ph)PVQS(ph)QSPSTNWSPAVPVK_
SRRM1 Phosphorylation S787 -0.948 -1.602 _KPPAPPS(ph)PVQSQS(ph)PSTNWSPAVPVK_
SRRM1 Phosphorylation S789 -0.821 _KPPAPPS(ph)PVQSQSPS(ph)TNWSPAVPVKK_
SRRM1 Phosphorylation T884 0.984 0.756 _KET(ph)ES(ph)EAEDNLDDLEK_
SRRM1 Phosphorylation S886 0.612 0.556 _KET(ph)ES(ph)EAEDNLDDLEK_
SRSF12 Phosphorylation S131 1.611 0.977 _S(ph)RSFDYNYR_
SRSF12 Phosphorylation S133 0.913 1.008 _S(ph)FDYNYR_
SRSF4 Phosphorylation S431 0.473 0.519 _EGRGES(ph)ENAGTNQETR_
SRSF4 Phosphorylation S456 0.062 0.006 _SKPNLPS(ph)ESR_
SRSF4 Phosphorylation S458 0.989 _SKPNLPS(ph)ESR_
TRA2B Phosphorylation S2 0.810 1.077 _(ac)S(ph)DSGEQNYGER_
TRA2B Phosphorylation S4 0.502 0.615 _(ac)SDS(ph)GEQNYGERES(ph)R_
TRA2B Phosphorylation S14 0.874 0.868 _(ac)SDS(ph)GEQNYGERES(ph)R_
TRA2B Phosphorylation T201 -0.428 -0.429 _RPHT(ph)PTPGIYMGR_
TXNL4A Ubiquitylation K139 0.359 -0.277 _DYSTK(gl)YRY_
WDR83 Ubiquitylation K47 0.052 _FNVDGNYCLTCGSDK(gl)TLK_


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