RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
POLR2L	2	-1.510	2.550	-0.148	0.893	1.580
CUL1	1	0.630	-0.610	-0.314	0.662	2.069	0.342	0.118
POLR1A	1	-1.130	0.600		0.018	-0.640
POLR1A	1	-1.130	0.600	0.940			0.421	0.350
POLR1B	1	-1.220	2.660	0.614	0.697	0.425	1.045	0.207
POLR2H	1			-0.862	1.290	2.109	0.203	0.602
MCC	1	-1.350	2.680
POLR1D	1	-1.180	1.710	3.224
POLR1D	1	-0.480	1.030	3.224
PDCD2	0	0.080	-0.480
FBXW11	0	-0.780	0.530	0.532			-1.791	0.313
IKBKG	0
RASAL2	0	1.030	0.010
NFKB2	0	1.750	-0.820
MTIF2	0	0.630	-0.750	-0.350	0.783	-0.267	0.657	0.874
IKBKB	0	0.400	0.610
NFKB1	0	0.720	-0.810
SKP1	0	1.470	-0.970		-1.305	-0.243	-0.093	0.054
SKP1	0	1.470	-0.970	-0.472
CD3EAP	0						-0.100	0.105
POLR1E	0	0.570	0.120				0.719	0.758
POLR1E	0	0.570	0.120				0.020	0.032
LRPPRC	0	0.110	-0.740	-0.075	0.032	-0.336	0.525	0.443
IQGAP2	0	0.570	-0.600	-0.934	-0.237	-0.246	0.574	0.202
RELA	0	-1.130	1.600	0.793
CHUK	0			-0.480

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CD3EAP	Phosphorylation	S126		-2.147	_ILEGPQQSLS(ph)GSPLQPIPASPPPQIPPGLRPR_
CD3EAP	Phosphorylation	S128		-2.441	_ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR_
CD3EAP	Phosphorylation	S136		-1.636	_ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR_
CD3EAP	Phosphorylation	T171		-0.767	_SALAPNLLT(ph)SGK_
CD3EAP	Phosphorylation	S172		-0.767	_SALAPNLLT(ph)SGK_
CD3EAP	Phosphorylation	S285	-1.326	-0.880	_QEQINTEPLEDTVLS(ph)PTK_
CD3EAP	Phosphorylation	S490		-1.234	_MPETVPQEEMPGPPLNSES(ph)GEEAPTGR_
CHUK	Ubiquitylation	K296		-1.637	_GGPVDLTLK(gl)QPR_
CUL1	Ubiquitylation	K262	0.119		_ESTEFLQQNPVTEYMK(gl)K_
CUL1	Ubiquitylation	K263	0.119	-0.055	_ESTEFLQQNPVTEYMK(gl)K_
CUL1	Ubiquitylation	K410	0.250	0.326	_FINNNAVTK(gl)MAQSSSK_
CUL1	Ubiquitylation	K417		0.761	_MAQSSSK(gl)SPELLAR_
CUL1	Ubiquitylation	K468	1.237		_FYAK(gl)MLAK_
CUL1	Ubiquitylation	K503		0.665	_QACGFEYTSK(gl)LQR_
CUL1	Ubiquitylation	K769	0.292		_VDGEK(gl)DTYSYLA_
FBXW11	Ubiquitylation	K466		0.325	_IVSGAYDGKIK(gl)_
IKBKB	Ubiquitylation	K106	0.253		_K(gl)YLNQFENCCGLR_
IKBKB	Phosphorylation	S672	0.670	0.244	_GPVSGS(ph)PDSMNASR_
IKBKG	Ubiquitylation	K285	-1.202	-0.389	_QEVIDKLK(gl)EEAEQHK_
IKBKG	Ubiquitylation	K309	0.123	0.725	_AQADIYK(gl)ADFQAER_
IKBKG	Ubiquitylation	K344		0.060	_LK(gl)ASCQESAR_
IKBKG	Phosphorylation	S387	-1.270	-1.418	_S(ph)PPEEPPDFCCPK_
IQGAP2	Phosphorylation	S16	0.126	0.190	_YGS(ph)IVDDER_
IQGAP2	Ubiquitylation	K837		-0.165	_IGLLVK(gl)NR_
MCC	Phosphorylation	S293	-1.041		_LQSVQATGPS(ph)SPGR_
MCC	Phosphorylation	S294	-1.402	-0.640	_LQSVQATGPSS(ph)PGR_
MCC	Phosphorylation	S405	-5.038	-4.462	_IREFEVETERLNS(ph)R_
NFKB1	Phosphorylation	S907	-0.025	0.113	_TTSQAHSLPLS(ph)PASTR_
NFKB2	Ubiquitylation	K741		-2.393	_GHTPLDLTCSTK(gl)VK_
NFKB2	Ubiquitylation	K743	-0.624		_GHTPLDLTCSTKVK(gl)_
PDCD2	Ubiquitylation	K144		-1.054	_VCGCLGPK(gl)TCSR_
PDCD2	Ubiquitylation	K286		-1.895	_DIPDCPCGAK(gl)R_
POLR1A	Ubiquitylation	K252	-1.523		_DSEPLGIEEAQIGK(gl)R_
POLR1A	Ubiquitylation	K664		0.225	_GLTDK(gl)VGR_
POLR1A	Ubiquitylation	K981		0.277	_EGLVDTAVK(gl)TSR_
POLR1A	Ubiquitylation	K1101		0.179	_IQEAVK(gl)ALK_
POLR1A	Ubiquitylation	K1184		2.297	_SYEK(gl)SELSLDR_
POLR1A	Phosphorylation	S1429		-0.141	_EKQEEEVDYES(ph)EEEEEREGEENDDEDMQEER_
POLR1A	Ubiquitylation	K1704	0.337		_SPSACLVVGK(gl)VVR_
POLR1A	Ubiquitylation	K1716		-0.858	_GGTGLFELK(gl)QPLR_
POLR1B	Ubiquitylation	K70		-0.356	_EQQK(gl)AALQELTR_
POLR1B	Ubiquitylation	K132		-0.885	_GTICK(gl)EANVYPAECR_
POLR1B	Ubiquitylation	K518		-1.235	_GADFAK(gl)MR_
POLR1B	Ubiquitylation	K882	0.509	0.340	_SK(gl)ENCVVDNIK_
POLR1D	Ubiquitylation	K15	-0.683		_ISGLK(gl)TSMAEGER_
POLR2H	Ubiquitylation	K146		0.110	_VYLLMK(gl)K_
POLR2H	Ubiquitylation	K147	0.013	-0.168	_VYLLMKK(gl)_
POLR2L	Ubiquitylation	K67	0.770	0.200	_LLNYAPLEK(gl)_
RASAL2	Phosphorylation	T132		-1.010	_T(ph)VSVPSEGQFPEYPPEGATK_
RASAL2	Phosphorylation	S134	-0.988	-0.690	_TVS(ph)VPSEGQFPEYPPEGATK_
RASAL2	Phosphorylation	S159	-0.749	-0.405	_LEVPAERS(ph)PR_
RASAL2	Phosphorylation	S164	1.064	-0.013	_S(ph)ISGTSTSEKPNSMDTANTSPFK_
RASAL2	Phosphorylation	S237	0.731	1.380	_S(ph)HESLLSPCSTVECLDLGR_
RASAL2	Phosphorylation	T761	-0.307		_SLTNPT(ph)PIQQQLR_
SKP1	Ubiquitylation	K130	0.138	0.140	_GK(gl)TPEEIRK_
SKP1	Phosphorylation	T131	-0.024	-0.138	_GKT(ph)PEEIRK_
SKP1	Ubiquitylation	K142	0.165	0.894	_TFNIK(gl)NDFTEEEEAQVRK_
SKP1	Ubiquitylation	K155	-0.096	0.069	_K(gl)ENQWCEEK_
SKP1	Ubiquitylation	K163	0.109	-0.020	_ENQWCEEK(gl)_