bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: PDCD2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDCD2 0 -1.054 0.080 -0.480

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDCD2 Ubiquitylation K144 -1.054 _VCGCLGPK(gl)TCSR_
PDCD2 Ubiquitylation K286 -1.895 _DIPDCPCGAK(gl)R_

Background Information for PDCD2:





Protein-protein Interactions for PDCD2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait MGRN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PDCD2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PDCD2_C IPR007320 0.24
Category members Znf_MYND IPR002893 0.06


Protein complexes (CORUM database) featuring PDCD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 5233 TNF-alpha/NF-kappa B signaling complex 5 Database 0.29


Categories featuring PDCD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006915 apoptotic process Database 2.12
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0012501 programmed cell death Database 0.1
Category members GO Category GO:0046872 metal ion binding Database 0


© Copyright Svejstrup Laboratory 2015