RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PPP1CA	3	2.150	-0.860
PPP1CA	3	2.150	-0.860	-0.250	0.634	0.981	-0.108	0.171
GSK3B	2	1.020	-0.870				-1.128	1.091
ZFYVE16	1	-1.080	1.970
TAB1	1	1.890	-0.670
TAB1	1	1.890	-0.670	1.657
NUP214	1	2.360	-1.290	0.632			0.242	0.147
CTDSP1	1	2.470	-1.010
SKI	1	-1.870	2.800		-1.139	-0.588
TAB2	0	-0.030	-0.580
PPM1A	0	-0.680	1.340	0.402
PPM1A	0	-0.680	1.340		-1.556	-0.874
BMP7	0
XIAP	0	0.600	-0.210
XIAP	0	0.600	-0.210	-1.128
BMPR1A	0	0.020	-0.130
SMAD5	0	0.640	-0.430
MAP3K7	0	-1.120	1.140	-1.048
BMPR1B	0	-0.810	0.900
SMAD4	0	0.420	-0.390		0.020	0.556		-0.485
CTDSPL	0	0.540	-0.790
BMP6	0	1.970	-0.630

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BMP6	Ubiquitylation	K409		-1.025	_VSSASDYNSSELK(gl)TACR_
BMP7	Ubiquitylation	K178		-0.107	_IYK(gl)DYIR_
BMPR1A	Ubiquitylation	K232	-0.391	0.172	_TIAK(gl)QIQMVR_
BMPR1A	Ubiquitylation	K477	0.265	-0.134	_EVVCVK(gl)R_
BMPR1B	Ubiquitylation	K477	1.033		_EIVCIK(gl)K_
CTDSP1	Ubiquitylation	K190		-0.115	_GNYVK(gl)DLSR_
CTDSPL	Ubiquitylation	K190		-0.115	_GNYVK(gl)DLSR_
GSK3B	Phosphorylation	S9	-0.483	0.010	_TTS(ph)FAESCKPVQQPSAFGSMK_
GSK3B	Ubiquitylation	K85		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Ubiquitylation	K86		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Phosphorylation	S215	0.296	0.477	_GEPNVS(ph)YICSR_
GSK3B	Phosphorylation	Y216	0.356	0.376	_GEPNVSY(ph)ICSR_
GSK3B	Phosphorylation	T390	2.800	2.527	_IQAAAST(ph)PTNATAASDANTGDR_
MAP3K7	Phosphorylation	S374	0.149	-0.337	_GS(ph)SVESLPPTSEGK_
MAP3K7	Phosphorylation	S375	0.171	-0.087	_GSS(ph)VESLPPTSEGK_
MAP3K7	Phosphorylation	S389	1.072	1.445	_RMS(ph)ADMSEIEAR_
MAP3K7	Phosphorylation	S439	0.246	0.198	_S(ph)IQDLTVTGTEPGQVSSR_
MAP3K7	Ubiquitylation	K474	-0.385	-0.242	_MITTSGPTSEK(gl)PTR_
MAP3K7	Ubiquitylation	K589	-0.104		_SLSTYYQQCK(gl)K_
MAP3K7	Ubiquitylation	K590	-0.551	0.560	_K(gl)QLEVIR_
NUP214	Phosphorylation	S430	-1.401	-1.571	_S(ph)PGSTPTTPTSSQAPQK_
NUP214	Phosphorylation	S433	-0.565	-1.014	_SPGS(ph)TPTT(ph)PTSSQAPQK_
NUP214	Phosphorylation	T436	-0.669	-0.832	_SPGS(ph)TPT(ph)TPTSSQAPQK_
NUP214	Phosphorylation	T437	0.179	-0.458	_SPGS(ph)TPTT(ph)PTSSQAPQK_
NUP214	Phosphorylation	T439		-0.425	_SPGS(ph)TPTTPT(ph)SSQAPQK_
NUP214	Phosphorylation	S646	1.342	0.945	_SSVLPS(ph)PSGR_
NUP214	Phosphorylation	S657	0.933	0.690	_SAQGSSS(ph)PVPSMVQK_
NUP214	Phosphorylation	S678	-0.473	-0.254	_ITPPAAKPGS(ph)PQAK_
NUP214	Phosphorylation	S940	0.199	0.044	_VPAKLS(ph)PMK_
NUP214	Phosphorylation	S1023	-0.863	-0.765	_TPS(ph)IQPSLLPHAAPFAK_
NUP214	Phosphorylation	S1081	-1.320	-1.047	_HGAPS(ph)PSHPISAPQAAAAAALR_
PPM1A	Ubiquitylation	K278		-0.176	_VCNEVVDTCLYK(gl)GSR_
PPP1CA	Ubiquitylation	K6	0.594	0.414	_(ac)SDSEK(gl)LNLDSIIGR_
PPP1CA	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CA	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CA	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CA	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CA	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
SKI	Ubiquitylation	K294	-0.126	-0.054	_AYILLSQDYTGK(gl)EEQAR_
SKI	Ubiquitylation	K365	-0.244	-0.390	_TLAGSSNK(gl)SLGCVHPR_
SKI	Phosphorylation	S431		-0.475	_VVS(ph)SPPCAAAVSR_
SKI	Phosphorylation	S432	-0.742	-0.438	_VVSS(ph)PPCAAAVSR_
SKI	Phosphorylation	S480	-1.160	-1.491	_LTVDTPGAPETLAPVAAPEEDKDS(ph)EAEVEVESR_
SMAD5	Ubiquitylation	K64	-2.082	-1.647	_ALSSPGQPSK(gl)CVTIPR_
TAB1	Phosphorylation	S7	-0.170	0.140	_S(ph)LLQSEQQPSWTDDLPLCHLSGVGSASNR_
TAB1	Phosphorylation	S16	-0.138	0.069	_SLLQSEQQPS(ph)WTDDLPLCHLSGVGSASNR_
TAB1	Ubiquitylation	K186	-1.015		_SYSADGK(gl)GTESHPPEDSWLK_
TAB1	Ubiquitylation	K371	0.032		_LSQLGLDAGK(gl)IK_
TAB1	Ubiquitylation	K373		-0.007	_LSQLGLDAGKIK(gl)_
TAB2	Phosphorylation	S580		-0.075	_S(ph)NSISQIPSLEEMQQLR_
TAB2	Phosphorylation	S582		0.331	_SNS(ph)ISQIPSLEEMQQLR_
TAB2	Ubiquitylation	K653	-0.519	-0.200	_SIIK(gl)TPK_
XIAP	Ubiquitylation	K31	-0.312	-0.651	_LK(gl)TFANFPSGSPVSASTLAR_
XIAP	Ubiquitylation	K208	-0.788	-0.846	_LK(gl)NWEPCDR_
XIAP	Ubiquitylation	K358	-0.720	0.047	_TTEK(gl)TPSLTR_
ZFYVE16	Ubiquitylation	K86	-0.638		_TLK(gl)GLTSIQNEK_
ZFYVE16	Ubiquitylation	K455	-1.793		_K(gl)IDPDQTVIR_
ZFYVE16	Phosphorylation	S939	1.491	1.197	_NEIIQS(ph)PISQVPSVEK_
ZFYVE16	Ubiquitylation	K1202	-2.966	3.670	_LGAEYK(gl)AYPAPLTSIR_
ZFYVE16	Ubiquitylation	K1257	0.166	0.179	_SCIK(gl)IPR_
ZFYVE16	Ubiquitylation	K1364	-0.812		_LALREQK(gl)DFK_
ZFYVE16	Ubiquitylation	K1367	-1.498		_DFK(gl)ITCGK_
ZFYVE16	Ubiquitylation	K1372		0.291	_ITCGK(gl)VDAVDLR_