RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CAD	1	1.760	-0.990	-0.363			-0.027	0.051
NME2	0	0.040	0.180	-0.783	0.303	-0.394	-0.805	-0.898
MEF2A	0	0.820	-0.530
MEF2A	0	0.820	-0.530
MEF2C	0	-0.980	1.550
MEF2C	0	-0.980	1.550
REST	0	-0.120	-0.050	-0.002	-1.235	-0.636
RBM22	0	0.250	0.540	-0.425	-1.788	0.001	-1.588	-0.510
PPP3CB	0	-1.240	2.140		-0.298	1.130
PPP3CB	0	-1.240	2.140				0.923	0.537
UMPS	0	1.150	-0.870	0.030			-0.319	-0.237
PPAT	0	-0.100	-0.040
TXN	0	1.900	-1.090		1.120		0.196	-5.026
MYC	0	0.170	0.550	-2.443	-0.949	-0.454		-1.290
PPP3CA	0	1.550	-1.230		-0.298	1.130
PPP3CA	0	1.550	-1.230				0.923	0.537
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
EIF2B5	0	-0.630	0.250	-0.711			0.154	-0.822
EGFR	0	-0.580	0.520				0.513	0.090
PPM1E	0	0.690	-0.090
GAS6	0	0.020	0.220		-1.517	-0.502
NME1	0	0.510	-0.420				0.232	0.470
NME1	0	0.510	-0.420	-0.783	0.303	-0.394	-0.805	-0.898

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CAD	Ubiquitylation	K739	-0.732	-0.798	_NSVTGGTAAFEPSVDYCVVK(gl)IPR_
CAD	Ubiquitylation	K760		0.489	_IGSCMK(gl)SVGEVMGIGR_
CAD	Ubiquitylation	K778		-0.005	_SFEEAFQK(gl)ALR_
CAD	Ubiquitylation	K1119		-1.239	_FLSSAAAVSK(gl)EHPVVISK_
CAD	Ubiquitylation	K1211	-0.235	-0.502	_DDQLK(gl)VIECNVR_
CAD	Ubiquitylation	K1309	0.012	-0.277	_AMLSTGFK(gl)IPK_
CAD	Ubiquitylation	K1325	-0.719	-0.613	_NK(gl)SELLPTVR_
CAD	Phosphorylation	S1406	0.530	0.612	_RLS(ph)SFVTK_
CAD	Ubiquitylation	K1411	-0.215	-0.224	_RLSSFVTK(gl)GYR_
CAD	Ubiquitylation	K1460	0.321		_VHVDCMTSQK(gl)LVR_
CAD	Ubiquitylation	K1657	2.804	-1.545	_LGPGK(gl)GEVRPELGSR_
CAD	Phosphorylation	T1827		-1.407	_WPQGAVPQLPPSAPAT(ph)SEMTTTPERPR_
CAD	Phosphorylation	S1859	-0.178	-0.084	_IHRAS(ph)DPGLPAEEPKEK_
EGFR	Phosphorylation	T693	0.486	-0.139	_ELVEPLT(ph)PSGEAPNQALLR_
EGFR	Phosphorylation	S991		-0.041	_MHLPS(ph)PTDSNFYR_
EIF2B5	Phosphorylation	S544	0.200	0.349	_GGS(ph)PQM(ox)DDIK_
MEF2A	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2A	Phosphorylation	S235	0.664	-0.092	_AS(ph)PNLIGATGANSLGK_
MEF2A	Phosphorylation	T253		-1.271	_VMPT(ph)KSPPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S255		-1.235	_VMPTKS(ph)PPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S408	-0.173	-0.049	_SEPIS(ph)PPRDR_
MEF2A	Phosphorylation	S494	-0.858	-1.232	_GDFHSPIVLGRPPNTEDRES(ph)PSVK_
MEF2C	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2C	Phosphorylation	S240	0.008	0.302	_NS(ph)PGLLVSPGNLNK_
MEF2C	Phosphorylation	S406	0.272	0.338	_SEPVS(ph)PPRDR_
MYC	Phosphorylation	S20	-1.444	-1.145	_PLNVS(ph)FTNR_
MYC	Phosphorylation	T72	-1.699	-1.813	_FELLPT(ph)PPLS(ph)PSRR_
MYC	Phosphorylation	S76	-1.777	-1.435	_FELLPTPPLS(ph)PSR_
MYC	Phosphorylation	S81		0.459	_S(ph)GLCSPSYVAVTPFSLR_
MYC	Phosphorylation	S85	0.199	0.073	_SGLCS(ph)PSYVAVTPFSLR_
MYC	Ubiquitylation	K162	-2.475	-1.259	_LVSEK(gl)LASYQAAR_
MYC	Phosphorylation	S295		-0.903	_SESGS(ph)PSAGGHSKPPHSPLVLK_
MYC	Phosphorylation	S307		-1.486	_SES(ph)GSPSAGGHSKPPHS(ph)PLVLK_
MYC	Ubiquitylation	K340		-2.449	_VK(gl)LDSVR_
MYC	Ubiquitylation	K403		-3.432	_DQIPELENNEK(gl)APK_
NME1	Ubiquitylation	K37	0.192	0.188	_TFIAIK(gl)PDGVQR_
NME1	Ubiquitylation	K51	-0.368	0.345	_GLVGEIIK(gl)R_
NME1	Ubiquitylation	K56	-0.240		_FEQK(gl)GFR_
NME1	Ubiquitylation	K125	-0.693	-0.414	_VMLGETNPADSK(gl)PGTIR_
NME1	Ubiquitylation	K264	0.448	0.582	_NIIHGSDSVK(gl)SAEK_
NME2	Ubiquitylation	K37	0.192	0.188	_TFIAIK(gl)PDGVQR_
NME2	Ubiquitylation	K51	-0.368	0.345	_GLVGEIIK(gl)R_
NME2	Ubiquitylation	K56	-0.240		_FEQK(gl)GFR_
NME2	Ubiquitylation	K125	-0.693	-0.414	_VMLGETNPADSK(gl)PGTIR_
NME2	Ubiquitylation	K264	0.448	0.582	_NIIHGSDSVK(gl)SAEK_
PPAT	Ubiquitylation	K403		-1.376	_GNTISPIIK(gl)LLK_
PPAT	Ubiquitylation	K406		-1.376	_GNTISPIIK(gl)LLK_
PPM1E	Ubiquitylation	K329		-0.500	_FVQK(gl)AAR_
PPP3CA	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CA	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CA	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CA	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PPP3CB	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CB	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CB	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CB	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
REST	Ubiquitylation	K280	0.406		_VYTCGK(gl)CNYFSDR_
REST	Phosphorylation	S864		-3.456	_ESVSTEDLSPPS(ph)PPLPK_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
TXN	Ubiquitylation	K94	0.520		_VGEFSGANK(gl)EK_