bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: UMPS

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
UMPS 0 -0.526 1.150 -0.870 0.030 -0.319 -0.237

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for UMPS:





Protein-protein Interactions for UMPS

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCDC12 Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF4A Cat. description Hein, Mann, Cell 2015
Category members IP bait KLC4 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH6 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP98 Cat. description Hein, Mann, Cell 2015
Category members IP bait SPINLW1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UMPS Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in UMPS

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PRTase-like IPR029057 0.32
Category members PRibTrfase_dom IPR000836 0.08
Category members RibuloseP-bd_barrel IPR011060 0.08


Protein complexes (CORUM database) featuring UMPS

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring UMPS

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0007565 female pregnancy Database 0.19
Category members Pathway Pathway_277 KEGG_PYRIMIDINE_METABOLISM 0 0.18
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0035690 cellular response to drug Database 0.1
Category members GO Category GO:0016740 transferase activity Database 0.07
Category members GO Category GO:0046134 pyrimidine nucleoside biosynthetic process Database 0.05
Category members Pathway Pathway_206 REACTOME_METABOLISM_OF_NUCLEOTIDES 0 0
Category members Pathway Pathway_278 REACTOME_PYRIMIDINE_METABOLISM 0 0
Category members Pathway Pathway_77 KEGG_DRUG_METABOLISM_OTHER_ENZYMES 0 0
Category members GO Category GO:0006206 pyrimidine nucleobase metabolic process Database 0
Category members GO Category GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process Database 0
Category members GO Category GO:0006221 pyrimidine nucleotide biosynthetic process Database 0
Category members GO Category GO:0006222 UMP biosynthetic process Database 0
Category members GO Category GO:0007595 lactation Database 0
Category members GO Category GO:0008152 metabolic process Database 0
Category members GO Category GO:0009116 nucleoside metabolic process Database 0
Category members GO Category GO:0044205 'de novo' UMP biosynthetic process Database 0
Category members GO Category GO:0055086 nucleobase-containing small molecule metabolic process Database 0


© Copyright Svejstrup Laboratory 2015