RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CEP55	2	2.010	-0.830				-1.229	-0.412
NEDD1	2	-0.540	1.020
CROCC	1	-0.830	1.020		2.082	0.397
TOP2A	1	-1.940	3.540
TOP2A	1	-1.940	3.540	-1.993			0.211	0.211
CEP170	1	-1.900	2.200
CEP170	1	0.260	-0.290
CEP170	1	-1.900	2.200	1.218			0.330	-0.062
CEP170	1	0.260	-0.290	1.218			0.330	-0.062
PCNT	1						0.094	0.158
CNTLN	0	0.010	-0.060
OFD1	0	1.920	-1.210				-0.269
MPHOSPH9	0	0.220	-0.670
SDCCAG8	0	0.350	-0.490
ROCK1	0	-1.420	2.380		-0.112	-0.732
BIRC5	0						-0.309	-0.536
NIN	0	0.060	-0.430				0.464	-0.153
NIN	0	0.060	-0.430
CEP76	0	-0.270	0.460
CEP192	0	0.280	-0.720
CCP110	0	-0.870	1.940
TUBD1	0	-0.290	0.900
CEP164	0
ALMS1	0	0.100	-0.080
CEP104	0	-0.140	-0.240
CCDC92	0	0.060	0.010
CEP89	0	-0.510	0.080
CEP250	0	-0.780	0.750	-0.268
TUBGCP3	0						0.947	-0.026
TUBG1	0	-0.710	1.260	-0.141	-0.630	-0.211	-0.844	-0.821
LRRCC1	0	-1.480	1.580
ODF2	0	-0.890	1.110
BNIP2	0	-0.790	0.810
BBS4	0	0.310	0.160
PLK2	0	0.900	-0.790
CENPJ	0	-1.550	2.060
POC5	0	0.740	-0.370
CETN3	0	0.230	-0.460
CCSAP	0	-0.120	0.870
SASS6	0	0.600	-0.230
CCNF	0	0.710	-0.520
SPICE1	0	0.290	-0.700
C2CD3	0	-0.390	-0.010
CNTROB	0	-0.580	0.820
CEP135	0	0.580	-1.210
TOPORS	0	0.090	-0.190
SFI1	0	-0.700	0.830
NEURL4	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ALMS1	Ubiquitylation	K4131	-6.338		_RIYEQLPEVQKK(gl)R_
BBS4	Ubiquitylation	K28		-0.615	_TQFPVSTESQK(gl)PR_
BBS4	Ubiquitylation	K302		-2.331	_YVAAISCLK(gl)R_
BBS4	Ubiquitylation	K408		-2.242	_NALAQYQEMEK(gl)K_
BBS4	Ubiquitylation	K409		-2.242	_NALAQYQEMEK(gl)K_
BIRC5	Ubiquitylation	K15		-1.446	_(ac)GAPTLPPAWQPFLK(gl)DHR_
BIRC5	Ubiquitylation	K113	0.088	-0.061	_HSSGCAFLSVK(gl)K_
BIRC5	Ubiquitylation	K114		-0.061	_HSSGCAFLSVK(gl)K_
BNIP2	Phosphorylation	S114	1.031	0.808	_KGS(ph)ITEYTAAEEK_
C2CD3	Ubiquitylation	K86	-0.837		_DALQTEPK(gl)AVR_
C2CD3	Phosphorylation	S2111	-1.046	-1.043	_EGPS(ph)CPSPGPFCR_
C2CD3	Phosphorylation	S2114		-1.200	_EGPSCPS(ph)PGPFCR_
CCDC92	Phosphorylation	S211	0.377	-0.019	_SLS(ph)APLHPEFEEVYR_
CCNF	Ubiquitylation	K514		0.681	_QVSLTAVK(gl)QR_
CCP110	Phosphorylation	S366	-1.207	-1.282	_LPS(ph)PEPSM(ox)S(ph)PK_
CCP110	Phosphorylation	S370		-0.596	_LPS(ph)PEPS(ph)MSPK_
CCP110	Phosphorylation	S372	-0.404	-0.839	_LPSPEPSMS(ph)PK_
CCP110	Ubiquitylation	K844	-0.786	0.031	_SFQSEAPLK(gl)R_
CCSAP	Phosphorylation	S145		0.546	_TRETDKS(ph)PTSTEPR_
CENPJ	Phosphorylation	S260	-0.281	-0.481	_RAS(ph)PNLFSEAQYQEAPVEK_
CEP104	Ubiquitylation	K105	-0.061	-1.010	_LGYVSLCDNEK(gl)TGCK_
CEP135	Phosphorylation	S439	0.656	0.789	_DRS(ph)PSRLDTFLK_
CEP164	Phosphorylation	S246	-1.251	-0.145	_GLEERLS(ph)PPLPHEER_
CEP170	Phosphorylation	S93	-0.958	-0.890	_S(ph)GDPRPQAAEP_
CEP170	Phosphorylation	S356		-0.606	_TEEDSKS(ph)IKSDVPVYLK_
CEP170	Phosphorylation	S446	-0.177	0.083	_S(ph)EEPSVSIPFLQTALLR_
CEP170	Phosphorylation	S450	-0.065	-0.720	_QKSEEPS(ph)VSIPFLQTALLR_
CEP170	Phosphorylation	S466	-0.016	0.353	_SSGS(ph)LGHRPSQEMDK_
CEP170	Phosphorylation	S630	1.206	0.442	_STGS(ph)ATSLASQGER_
CEP170	Phosphorylation	T664	0.702	0.676	_VVT(ph)QRSEIGEK_
CEP170	Phosphorylation	S667		0.551	_VVTQRS(ph)EIGEK_
CEP170	Phosphorylation	S838	-0.635	-0.728	_QGS(ph)FTIEKPSPNIPIELIPHINK_
CEP170	Phosphorylation	S879	0.073	0.440	_S(ph)ESLDPDSSMDTTLILK_
CEP170	Phosphorylation	S881	0.389	0.423	_SES(ph)LDPDSSMDTTLILK_
CEP170	Phosphorylation	S1019	-0.693	-0.831	_IRQPS(ph)VDLTDDDQTSSVPHSAISDIM(ox)SSDQETYSCKPHGR_
CEP170	Phosphorylation	T1023	-1.927	-0.804	_IRQPSVDLT(ph)DDDQTSSVPHSAISDIM(ox)SSDQETYSCKPHGR_
CEP170	Phosphorylation	S1112	1.157	-0.033	_LGEAS(ph)DSELADADK_
CEP170	Phosphorylation	S1247	-0.698		_RFPTDYASTSEDEFGS(ph)NRNSPK_
CEP170	Phosphorylation	S1251	0.698	-0.249	_RFPTDYASTSEDEFGSNRNS(ph)PK_
CEP170	Phosphorylation	T1259	-0.450	-0.149	_LRT(ph)SPALK_
CEP170	Phosphorylation	S1260	-0.536	0.068	_LRTS(ph)PALK_
CEP170	Phosphorylation	S1280	-0.146		_LQSAGSAMPTSSS(ph)FK_
CEP170	Phosphorylation	S1529	-0.172	1.510	_SSPVNNHHS(ph)PGQTPTLGQPEAR_
CEP192	Phosphorylation	S1755	-0.561	-0.297	_GEVISSGSKPLS(ph)PGPCLDIPSILSNK_
CEP192	Ubiquitylation	K2078		-0.840	_EFLQPSSK(gl)ASLESTSDLGASGK_
CEP250	Ubiquitylation	K1254	1.110		_LHQDLWK(gl)TQQTR_
CEP250	Ubiquitylation	K1574	0.155	1.217	_MECQQK(gl)LIK_
CEP250	Phosphorylation	S2229	0.282	0.334	_LHS(ph)PGATSTAELGSR_
CEP250	Phosphorylation	S2322	-0.190		_AAQAGS(ph)LEISK_
CEP55	Ubiquitylation	K22	-0.367		_WGSKPSNSK(gl)SETTLEK_
CEP55	Ubiquitylation	K31	0.449		_LK(gl)GEIAHLK_
CEP55	Ubiquitylation	K48	0.226	0.279	_TSVDEITSGK(gl)GK_
CEP55	Ubiquitylation	K50	0.539	0.140	_TSVDEITSGKGK(gl)_
CEP55	Ubiquitylation	K92	0.512		_LRDQLK(gl)AR_
CEP55	Ubiquitylation	K145	0.288	0.387	_IAELESK(gl)TNTLR_
CEP55	Ubiquitylation	K180	-0.597		_DALEK(gl)NQQWLVYDQQR_
CEP55	Ubiquitylation	K207	0.577		_IFELEK(gl)K_
CEP55	Ubiquitylation	K208	0.577		_IFELEK(gl)K_
CEP55	Ubiquitylation	K233	0.011	-0.975	_KPESEGYLQEEK(gl)QK_
CEP55	Ubiquitylation	K235	-0.505	-0.975	_KPESEGYLQEEK(gl)QK_
CEP55	Ubiquitylation	K245	-0.005		_CYNDLLASAK(gl)K_
CEP55	Ubiquitylation	K246	1.149		_K(gl)DLEVER_
CEP55	Phosphorylation	S428	0.976	0.483	_S(ph)PTAALNESLVECPK_
CEP55	Phosphorylation	T430	1.582	0.356	_SPT(ph)AALNESLVECPK_
CEP76	Phosphorylation	S83	-0.021	0.066	_ELNFVTDSVEQELPSS(ph)PKQPICFDR_
CEP89	Ubiquitylation	K682		0.430	_LLEQQEDFAGK(gl)TAQYR_
CETN3	Ubiquitylation	K62		0.026	_ALGFDVK(gl)K_
CETN3	Ubiquitylation	K63	-1.435	0.026	_ALGFDVKK(gl)_
CETN3	Ubiquitylation	K117	-0.835		_LFDDDDSGK(gl)ISLR_
CNTLN	Ubiquitylation	K281		-0.114	_YSTDAK(gl)IK_
CNTROB	Phosphorylation	S62	-0.857	-0.268	_AQLYLPSTS(ph)PPHEGLDGFAQELSR_
CROCC	Phosphorylation	S512		-0.142	_RGPS(ph)PACSDSSTLALIHSALHK_
CROCC	Ubiquitylation	K674		-0.873	_QLEQLEGK(gl)R_
CROCC	Ubiquitylation	K972	-6.848	-7.739	_ASLDKELM(ox)AQK(gl)LVQAER_
CROCC	Phosphorylation	S1451		-1.104	_APS(ph)PAPRPVPGS(ph)PAR_
CROCC	Phosphorylation	S1460		-1.104	_APS(ph)PAPRPVPGS(ph)PAR_
LRRCC1	Ubiquitylation	K501	0.904	1.470	_LQNEIK(gl)K_
MPHOSPH9	Phosphorylation	S722	1.212	-0.728	_DSS(ph)PGSSSTSLLIK_
MPHOSPH9	Phosphorylation	S854		-1.025	_NES(ph)SPIRFDILLDDLDTVPVSTLQR_
MPHOSPH9	Phosphorylation	S855		-1.025	_NES(ph)SPIRFDILLDDLDTVPVSTLQR_
NEDD1	Phosphorylation	S418	2.570	2.332	_SSLGDMFS(ph)PIRDDAVVNK_
NEDD1	Phosphorylation	T522		0.255	_LVTSGAESGNLNT(ph)SPSSNQTR_
NEDD1	Phosphorylation	S523	0.186	0.129	_LVTSGAESGNLNTS(ph)PSSNQTR_
NEURL4	Phosphorylation	S502	-1.157	-0.607	_ALS(ph)PEGALR_
NEURL4	Ubiquitylation	K633	0.696	0.411	_LK(gl)AGDTVGVVR_
NEURL4	Phosphorylation	S907		0.193	_SFPLHS(ph)PVAGVAHR_
NEURL4	Ubiquitylation	K1232	0.018		_ICEK(gl)FGPNLDTCPEGTILGLR_
NEURL4	Ubiquitylation	K1415	0.536		_LEAGTLTKK(gl)_
NIN	Phosphorylation	S1783		0.414	_VQNLEDTVQNVNLQM(ox)S(ph)R_
ODF2	Ubiquitylation	K295	-1.045		_LMEQQGALLK(gl)R_
OFD1	Ubiquitylation	K218		0.010	_AEMCQK(gl)LK_
OFD1	Ubiquitylation	K256		-0.642	_ACQAK(gl)SEALVLR_
OFD1	Ubiquitylation	K533		-0.930	_ASVK(gl)SLTTQVADLK_
OFD1	Phosphorylation	S669	-0.349	-0.888	_S(ph)PPSLHLLEAFK_
OFD1	Phosphorylation	S735	0.482	-0.458	_RLS(ph)STPLPK_
OFD1	Phosphorylation	S762	-0.735	-0.990	_SHIAS(ph)PSPCPDR_
OFD1	Phosphorylation	S774	-0.145	-0.111	_MPLPS(ph)PTESR_
OFD1	Phosphorylation	S788		-0.298	_HSLSIPPVS(ph)SPPEQK_
OFD1	Phosphorylation	S789		-0.909	_HSLSIPPVSS(ph)PPEQK_
OFD1	Phosphorylation	S899		-0.092	_RQS(ph)NLQEVLER_
PCNT	Ubiquitylation	K505	1.075		_VEDLEQLK(gl)QR_
PCNT	Phosphorylation	S1653		1.274	_RES(ph)EVLDLKEQLEK_
PCNT	Phosphorylation	S2177		0.088	_NWDSLIPDEMPDS(ph)PIQEK_
PCNT	Phosphorylation	S2192		1.692	_SECQDMSLSS(ph)PTSVLGGSR_
PCNT	Phosphorylation	S2214		0.162	_KS(ph)PVGMLDLSSWSSPEVLR_
PCNT	Phosphorylation	S2327		0.058	_DVEDFITTSFDSQETLSS(ph)PPPGLEGK_
PCNT	Phosphorylation	S2352	-0.599	-0.395	_LS(ph)PGSGGPEAQTAGPVTPASISGR_
PCNT	Phosphorylation	S2355	-0.685	-0.511	_LSPGS(ph)GGPEAQTAGPVTPASISGR_
PCNT	Ubiquitylation	K2685	-0.556		_ESQSAK(gl)ALEELR_
PCNT	Ubiquitylation	K3099		-0.180	_SAWK(gl)PDETAPQSSLR_
PLK2	Ubiquitylation	K438		-0.272	_SGTPAVENK(gl)QQIGDAIR_
POC5	Ubiquitylation	K481		0.204	_VVTSAQQK(gl)AGR_
ROCK1	Phosphorylation	S1105	-0.245	-0.845	_LLDLSDSTSVAS(ph)FPSADETDGNLPESR_
SASS6	Phosphorylation	S510	-0.384	-0.505	_SGIS(ph)PNLNVVDGR_
SDCCAG8	Phosphorylation	S4	1.097	1.380	_(ac)AKS(ph)PENSTLEEILGQYQR_
SFI1	Phosphorylation	S1142		-0.357	_AGPGLS(ph)TAGSLDLEAELEEIQQQLLHYQTTK_
SPICE1	Phosphorylation	S640	-0.079	0.054	_S(ph)PTFSEELPVLGDGQQLR_
SPICE1	Phosphorylation	T642	0.001	-0.182	_SPT(ph)FSEELPVLGDGQQLR_
SPICE1	Phosphorylation	S760		-0.972	_LVGLNLS(ph)PPMSPVQLPLR_
TOP2A	Phosphorylation	S4	-0.623	-0.424	_(ac)M(ox)EVS(ph)PLQPVNENM(ox)QVNK_
TOP2A	Ubiquitylation	K17	-0.250		_(ac)MEVSPLQPVNENMQVNK(gl)IKK_
TOP2A	Ubiquitylation	K96		0.284	_IFDEILVNAADNK(gl)QR_
TOP2A	Ubiquitylation	K131	0.553	-0.638	_GIPVVEHK(gl)VEK_
TOP2A	Ubiquitylation	K386	-2.203		_ENMTLQPK(gl)SFGSTCQLSEK_
TOP2A	Ubiquitylation	K397	0.214	0.360	_SFGSTCQLSEK(gl)FIK_
TOP2A	Ubiquitylation	K426		-0.502	_AQVQLNKK(gl)_
TOP2A	Ubiquitylation	K489	-0.029	0.171	_GK(gl)ILNVR_
TOP2A	Ubiquitylation	K520		-0.260	_IVGLQYKK(gl)_
TOP2A	Ubiquitylation	K529	0.862	0.065	_NYEDEDSLK(gl)TLR_
TOP2A	Ubiquitylation	K614		-0.287	_YYK(gl)GLGTSTSK_
TOP2A	Ubiquitylation	K622		-0.581	_GLGTSTSK(gl)EAK_
TOP2A	Ubiquitylation	K632	-0.171	-0.248	_EYFADMK(gl)R_
TOP2A	Ubiquitylation	K655	-0.091	-0.407	_YSGPEDDAAISLAFSK(gl)K_
TOP2A	Ubiquitylation	K656	-0.091	-0.441	_YSGPEDDAAISLAFSKK(gl)_
TOP2A	Ubiquitylation	K723		-1.207	_SIPSMVDGLK(gl)PGQR_
TOP2A	Ubiquitylation	K1088		0.061	_GYDSDPVK(gl)AWK_
TOP2A	Phosphorylation	S1142	0.072	0.040	_VPDEEENEES(ph)DNEKETEK_
TOP2A	Ubiquitylation	K1159	-0.411	-0.659	_EQELDTLK(gl)R_
TOP2A	Ubiquitylation	K1199	-0.674	-1.759	_EKQDEQVGLPGKGGK(gl)_
TOP2A	Phosphorylation	S1249	-0.907	-0.546	_TQMAEVLPS(ph)PR_
TOP2A	Phosphorylation	S1283	0.168	0.028	_NENTEGS(ph)PQEDGVELEGLK_
TOP2A	Phosphorylation	S1411	0.232	-0.105	_S(ph)VVSDLEADDVK_
TOP2A	Phosphorylation	S1414	0.884	0.877	_SVVS(ph)DLEADDVK_
TOP2A	Phosphorylation	S1429	-1.415	-2.977	_GSVPLSS(ph)SPPATHFPDETEITNPVPK_
TOP2A	Phosphorylation	S1430		-1.317	_GSVPLSSS(ph)PPATHFPDETEITNPVPK_
TOP2A	Phosphorylation	T1434	-1.348		_GSVPLSSSPPAT(ph)HFPDETEITNPVPK_
TOP2A	Phosphorylation	S1506		-0.384	_RKPS(ph)TSDDSDSNFEK_
TOPORS	Ubiquitylation	K73		-2.412	_ELAASAPARPAPASSEIMASAAK(gl)EFK_
TOPORS	Ubiquitylation	K76		-2.551	_EFK(gl)MDNFSPK_
TOPORS	Ubiquitylation	K83	-0.537	-0.928	_MDNFSPK(gl)AGTSK_
TOPORS	Phosphorylation	S98	-0.529	-0.409	_LQQTVPADAS(ph)PDSK_
TOPORS	Ubiquitylation	K249	-0.396	0.347	_K(gl)IQEQDIINFRR_
TOPORS	Phosphorylation	S585	0.204	0.058	_VYS(ph)PYNHR_
TUBD1	Ubiquitylation	K47		-1.041	_ENEAYQASCK(gl)ER_
TUBD1	Ubiquitylation	K79		-0.463	_VINQMLSK(gl)AAQSGQWK_
TUBG1	Ubiquitylation	K287	1.041	-0.053	_K(gl)TTVLDVMR_
TUBG1	Ubiquitylation	K301	0.057	-0.550	_LLQPK(gl)NVMVSTGR_
TUBGCP3	Ubiquitylation	K280		0.054	_VEGK(gl)ANLSR_