bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
REACTOME_GLYCOSAMINOGLYCAN_METABOLISM
(Pathway_73)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
CHPF2 1 -2.100 3.650
VCAN 1 0.760 -0.630
VCAN 1 0.760 -0.630
CHST12 1 2.390 -0.800
SDC2 1 -1.780 3.110
CD44 0 0.270 -0.230
HEXB 0 -0.370 0.060 0.103
SLC9A1 0 1.000 -1.310
NAGLU 0 -0.400 0.020
DSE 0 0.820 -0.790
ABCC5 0 -0.030 0.180
CHST3 0 0.170 0.150
SDC4 0 1.110 -0.650
LYVE1 0 -1.030 2.000
B3GAT3 0 1.090 -0.530 1.147
GXYLT1 0 0.190 -0.450 1.012 -0.711
EXT2 0 -1.290 1.340
GLB1 0 -1.310 1.460 0.469 0.688
B3GALT6 0 -0.010 -0.080 0.364 -0.404
AGRN 0 -0.130 0.060 -0.939

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
ABCC5 Phosphorylation S509 0.227 _NATLAWDSSHSSIQNS(ph)PK_
ABCC5 Ubiquitylation K961 -0.860 _SPMK(gl)FFDTTPTGR_
CD44 Ubiquitylation K739 -0.024 0.134 _NLQNVDMK(gl)IGV_
CHPF2 Ubiquitylation K727 -0.748 _AVEPGLVQK(gl)FSLR_
CHST12 Ubiquitylation K142 -1.045 _GFCANSSLAFPTK(gl)ER_
CHST3 Ubiquitylation K381 -1.704 _GPLQK(gl)AR_
DSE Ubiquitylation K379 -1.657 _VVEGPGTPSK(gl)GQR_
DSE Ubiquitylation K571 -1.407 _GEGVGAYNPQLNLK(gl)NVQR_
EXT2 Ubiquitylation K126 0.339 _VYIYALKK(gl)_
EXT2 Ubiquitylation K181 0.503 _IK(gl)ETAQAMAQLSR_
EXT2 Ubiquitylation K523 -0.044 _VPLK(gl)VVR_
EXT2 Ubiquitylation K531 0.165 _TAENK(gl)LSNR_
GLB1 Ubiquitylation K91 0.224 _DSFLK(gl)DGQPFR_
LYVE1 Ubiquitylation K308 -0.410 _NPEESK(gl)SPSK_
NAGLU Ubiquitylation K59 -0.842 _ALAAK(gl)PGLDTYSLGGGGAAR_
SDC2 Ubiquitylation K193 -0.696 -0.929 _KPSSAAYQK(gl)APTK_
SDC2 Ubiquitylation K197 -0.160 0.647 _APTK(gl)EFYA_
SDC4 Ubiquitylation K190 -0.979 _K(gl)APTNEFYA_
SLC9A1 Phosphorylation S693 0.458 0.404 _INNYLTVPAHKLDS(ph)PTM(ox)SR_
SLC9A1 Phosphorylation S703 -0.097 0.010 _IGS(ph)DPLAYEPK_
SLC9A1 Phosphorylation S785 -0.871 -0.971 _ETSSPGTDDVFTPAPSDS(ph)PSSQR_
VCAN Ubiquitylation K98 2.161 _IGQDYK(gl)GR_
VCAN Ubiquitylation K347 3.178 _FDAYCFK(gl)R_
VCAN Phosphorylation S2130 0.600 0.798 _QEIESETTS(ph)EEQIQEEK_


© Copyright Svejstrup Laboratory 2015