bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: CHST3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CHST3 0 -1.704 0.170 0.150

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CHST3 Ubiquitylation K381 -1.704 _GPLQK(gl)AR_

Background Information for CHST3:


Pubmed-CHST3 »
Uniprot-CHST3 »
Biogrid-CHST3 »
ProteomicsDB-CHST3 »

Tumorportal-CHST3 »
COSMIC-CHST3 »
GenomeRNAi-CHST3 »
Genecards-CHST3


Protein-protein Interactions for CHST3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AVP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CRP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTCH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCGB2A2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CHST3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members Sulfotransferase_dom IPR000863 0
Category members Carbohydrate_sulfotransferase IPR016469 0


Protein complexes (CORUM database) featuring CHST3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CHST3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members Pathway Pathway_73 REACTOME_GLYCOSAMINOGLYCAN_METABOLISM 0 1.71
Category members GO Category GO:0030203 glycosaminoglycan metabolic process Database 1.44
Category members Pathway Pathway_471 REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 0 0.6
Category members GO Category GO:0030204 chondroitin sulfate metabolic process Database 0.36
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members GO Category GO:0050698 proteoglycan sulfotransferase activity Database 0.04
Category members GO Category GO:0008146 sulfotransferase activity Database 0.01
Category members Pathway Pathway_480 KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE 0 0
Category members Pathway Pathway_481 REACTOME_CHONDROITIN_SULFATE_BIOSYNTHESIS 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0006790 sulfur compound metabolic process Database 0
Category members GO Category GO:0008459 chondroitin 6-sulfotransferase activity Database 0
Category members GO Category GO:0030206 chondroitin sulfate biosynthetic process Database 0
Category members GO Category GO:0043029 T cell homeostasis Database 0


.

© Copyright Svejstrup Laboratory 2015