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Query: B3GALT6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
B3GALT6 0 -0.040 -0.010 -0.080 0.364 -0.404

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for B3GALT6:


Pubmed-B3GALT6 »
Uniprot-B3GALT6 »
Biogrid-B3GALT6 »
ProteomicsDB-B3GALT6 »

Tumorportal-B3GALT6 »
COSMIC-B3GALT6 »
GenomeRNAi-B3GALT6 »
Genecards-B3GALT6


Protein-protein Interactions for B3GALT6
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C19orf46 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNA10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PEX19 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCN3B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in B3GALT6
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Glyco_trans_31 IPR002659 0.38


Protein complexes (CORUM database) featuring B3GALT6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring B3GALT6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members Pathway Pathway_73 REACTOME_GLYCOSAMINOGLYCAN_METABOLISM 0 1.71
Category members GO Category GO:0030203 glycosaminoglycan metabolic process Database 1.44
Category members GO Category GO:0008378 galactosyltransferase activity Database 0.64
Category members Pathway Pathway_471 REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 0 0.6
Category members GO Category GO:0016020 membrane Database 0.52
Category members Pathway Pathway_79 REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM 0 0.49
Category members GO Category GO:0030204 chondroitin sulfate metabolic process Database 0.36
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members Pathway Pathway_479 REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS 0 0.21
Category members GO Category GO:0006486 protein glycosylation Database 0.21
Category members GO Category GO:0006024 glycosaminoglycan biosynthetic process Database 0.18
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members Pathway Pathway_477 KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE 0 0.04
Category members Disease phenotype Ehlers-Danlos_syndrome_progeroid_type Ehlers-Danlos syndrome progeroid type Database 0.04
Category members GO Category GO:0008499 UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity Database 0.01
Category members Pathway Pathway_480 KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0005797 Golgi medial cisterna Database 0
Category members GO Category GO:0015012 heparan sulfate proteoglycan biosynthetic process Database 0
Category members GO Category GO:0030206 chondroitin sulfate biosynthetic process Database 0
Category members GO Category GO:0032580 Golgi cisterna membrane Database 0
Category members GO Category GO:0035250 UDP-galactosyltransferase activity Database 0


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