Results for the Category
REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS
(Pathway_479)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| VCAN | 1 | 0.760 | -0.630 | |||||
| VCAN | 1 | 0.760 | -0.630 | |||||
| SDC2 | 1 | -1.780 | 3.110 | |||||
| SDC4 | 0 | 1.110 | -0.650 | |||||
| B3GAT3 | 0 | 1.090 | -0.530 | 1.147 | ||||
| GXYLT1 | 0 | 0.190 | -0.450 | 1.012 | -0.711 | |||
| B3GALT6 | 0 | -0.010 | -0.080 | 0.364 | -0.404 | |||
| AGRN | 0 | -0.130 | 0.060 | -0.939 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| SDC2 | Ubiquitylation | K193 | -0.696 | -0.929 | _KPSSAAYQK(gl)APTK_ |
| SDC2 | Ubiquitylation | K197 | -0.160 | 0.647 | _APTK(gl)EFYA_ |
| SDC4 | Ubiquitylation | K190 | -0.979 | _K(gl)APTNEFYA_ | |
| VCAN | Ubiquitylation | K98 | 2.161 | _IGQDYK(gl)GR_ | |
| VCAN | Ubiquitylation | K347 | 3.178 | _FDAYCFK(gl)R_ | |
| VCAN | Phosphorylation | S2130 | 0.600 | 0.798 | _QEIESETTS(ph)EEQIQEEK_ |
.
© Copyright Svejstrup Laboratory 2015