bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: GXYLT1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GXYLT1 0 0.301 0.190 -0.450 1.012 -0.711

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for GXYLT1:





Protein-protein Interactions for GXYLT1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GXYLT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GXYLT1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Nucleotide-diphossugar_trans IPR029044 0.21
Category members Glyco_trans_8 IPR002495 0


Protein complexes (CORUM database) featuring GXYLT1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GXYLT1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members Pathway Pathway_73 REACTOME_GLYCOSAMINOGLYCAN_METABOLISM 0 1.71
Category members GO Category GO:0030203 glycosaminoglycan metabolic process Database 1.44
Category members GO Category GO:0016266 O-glycan processing Database 0.62
Category members Pathway Pathway_471 REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 0 0.6
Category members Pathway Pathway_79 REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM 0 0.49
Category members GO Category GO:0030204 chondroitin sulfate metabolic process Database 0.36
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members Pathway Pathway_479 REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS 0 0.21
Category members GO Category GO:0016757 transferase activity, transferring glycosyl groups Database 0.19
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0035252 UDP-xylosyltransferase activity Database 0


© Copyright Svejstrup Laboratory 2015