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Query: CHPF2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CHPF2 1 2.902 -2.100 3.650

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CHPF2 Ubiquitylation K727 -0.748 _AVEPGLVQK(gl)FSLR_

Background Information for CHPF2:





Protein-protein Interactions for CHPF2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FEN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait GOLT1B Cat. description Hein, Mann, Cell 2015
Category members IP bait PTPN13 Cat. description Hein, Mann, Cell 2015
Category members IP bait DPEP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCGB2A2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CHPF2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Fringe-like IPR003378 0.04
Category members Chond_GalNAc IPR008428 0


Protein complexes (CORUM database) featuring CHPF2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CHPF2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members Pathway Pathway_73 REACTOME_GLYCOSAMINOGLYCAN_METABOLISM 0 1.71
Category members GO Category GO:0030203 glycosaminoglycan metabolic process Database 1.44
Category members Pathway Pathway_471 REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 0 0.6
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0030204 chondroitin sulfate metabolic process Database 0.36
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members GO Category GO:0016757 transferase activity, transferring glycosyl groups Database 0.19
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members Pathway Pathway_480 KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE 0 0
Category members Pathway Pathway_481 REACTOME_CHONDROITIN_SULFATE_BIOSYNTHESIS 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0016758 transferase activity, transferring hexosyl groups Database 0
Category members GO Category GO:0030206 chondroitin sulfate biosynthetic process Database 0
Category members GO Category GO:0032580 Golgi cisterna membrane Database 0
Category members GO Category GO:0050510 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity Database 0


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