RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SND1	2	-1.870	3.140	1.017	1.256	-1.516
ARID4B	1	-0.520	0.690	0.971	-0.275	0.174	-0.031	-0.144
ALG13	1	0.890	-1.050	1.053	0.029	0.494
ALG13	1	3.500	-1.400	1.053	0.029	0.494
KDM4B	1	-0.310	-0.360
LBR	1	-0.600	0.310				0.658	0.471
TDRKH	1	-0.560	0.080					1.534
PHF20	0	-1.230	1.970
ARID4A	0	-0.440	1.370	1.114			-1.096	0.597
KDM4A	0	1.040	-0.260	-0.576
TDRD3	0	-1.210	1.400		0.288	1.145
SMNDC1	0	0.060	-0.120		-0.870	-0.139	-0.838	-0.317
AKAP1	0
AKAP1	0			-2.003			-0.132	-0.132
RNF17	0	-1.150	2.390
RNF17	0	0.380	-0.390
MTF2	0						1.093	0.072
SETDB1	0	0.110	0.270
SMN1	0	-1.430	1.720		0.023	0.246		-1.731
SMN1	0	-0.560	0.640		0.023	0.246		-1.731
SMN2	0				0.023	0.246		-1.731
TDRD7	0	-0.390	1.130

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKAP1	Phosphorylation	S147	0.424	0.589	_S(ph)ESSGILPNTTDM(ox)R_
AKAP1	Phosphorylation	S149	0.307	0.682	_SES(ph)SGILPNTTDMR_
AKAP1	Phosphorylation	S192	0.935	1.193	_SIPLECPLS(ph)SPK_
AKAP1	Phosphorylation	S193	1.023	1.057	_SIPLECPLSS(ph)PK_
AKAP1	Phosphorylation	S487	0.615	0.512	_SLLSS(ph)PTK_
AKAP1	Ubiquitylation	K667		-0.208	_LIGK(gl)QGR_
AKAP1	Ubiquitylation	K842		0.367	_YVDYGGYK(gl)R_
AKAP1	Ubiquitylation	K845	-0.226	0.471	_VK(gl)VDVLR_
ALG13	Ubiquitylation	K68		0.277	_YKDSLK(gl)EDIQK_
ALG13	Ubiquitylation	K94		-0.565	_GK(gl)PLVVVINEK_
ALG13	Ubiquitylation	K137		-0.814	_VLTCPGQAK(gl)SIASAPGK_
ALG13	Phosphorylation	S216		1.020	_S(ph)LNEASMDEYLGSLGLFR_
ALG13	Ubiquitylation	K238		-0.752	_KLTAK(gl)DASCLFR_
ALG13	Ubiquitylation	K263		0.896	_K(gl)ACVSYMR_
ALG13	Ubiquitylation	K386		-0.264	_TAIK(gl)LFR_
ALG13	Ubiquitylation	K411		-0.507	_NNAVTGSEDAHTDYK(gl)SSNQNR_
ALG13	Ubiquitylation	K458		-0.539	_VLK(gl)ALDPEIYR_
ALG13	Ubiquitylation	K482		0.513	_ELQK(gl)SDYMEYAGR_
ALG13	Ubiquitylation	K683		-0.785	_VDFYPGPGK(gl)R_
ARID4A	Phosphorylation	S863		0.509	_ILGQS(ph)SPEKK_
ARID4A	Phosphorylation	S864	0.184	-0.026	_ILGQSS(ph)PEK_
ARID4B	Phosphorylation	S675	-0.335	-0.381	_LSKPPFQTNPS(ph)PEMVSK_
ARID4B	Phosphorylation	S790		0.615	_DIEVLS(ph)EDTDYEEDEVTK_
ARID4B	Phosphorylation	S1153		1.670	_GTNSS(ph)DSEELSAGESITK_
KDM4A	Ubiquitylation	K105		-1.070	_IANSDK(gl)YCTPR_
KDM4A	Ubiquitylation	K251		-0.699	_MTLISPLMLK(gl)K_
KDM4A	Ubiquitylation	K252		-0.699	_MTLISPLMLK(gl)K_
KDM4A	Ubiquitylation	K820		-1.283	_SPVDVSK(gl)IPLPR_
KDM4A	Ubiquitylation	K893		-0.347	_AK(gl)GALQSITAGQK_
KDM4B	Ubiquitylation	K302		0.088	_WIDYGK(gl)VATQCTCR_
KDM4B	Ubiquitylation	K334		-0.129	_YELWK(gl)QGK_
KDM4B	Phosphorylation	S600		0.260	_EPVS(ph)PMELTGPEDGAASSGAGR_
KDM4B	Ubiquitylation	K638		-0.589	_AGEGQAPSTFSKLK(gl)_
KDM4B	Ubiquitylation	K962		0.437	_AVSLGQVVITK(gl)NR_
KDM4B	Ubiquitylation	K1028		-0.559	_WTDGNLYK(gl)AK_
KDM4B	Ubiquitylation	K1030		-0.709	_WTDGNLYKAK(gl)_
KDM4B	Phosphorylation	T1099	2.839	-0.307	_VGT(ph)PLATEDSGR_
LBR	Phosphorylation	T58	0.988	-0.034	_ENDIKPLT(ph)SFR_
LBR	Phosphorylation	S59	1.927	0.405	_ENDIKPLTS(ph)FR_
LBR	Phosphorylation	S97	0.786	0.479	_RS(ph)ASASHQADIK_
LBR	Phosphorylation	S99	0.671	0.999	_SAS(ph)ASHQADIK_
LBR	Phosphorylation	S101		0.461	_RSASAS(ph)HQADIK_
LBR	Ubiquitylation	K107	0.757	-0.107	_SASASHQADIK(gl)EARR_
LBR	Ubiquitylation	K123	-0.631		_LTPLILK(gl)PFGNSISR_
LBR	Phosphorylation	S128	-0.301	0.481	_LTPLILKPFGNS(ph)ISR_
LBR	Phosphorylation	S130	-0.662	0.294	_LTPLILKPFGNS(ph)ISR_
LBR	Ubiquitylation	K176	-0.492		_REEVK(gl)LK_
LBR	Ubiquitylation	K178	-0.282	0.282	_LK(gl)EIDSK_
LBR	Ubiquitylation	K183	-0.639	0.960	_LKEIDSK(gl)EEK_
LBR	Ubiquitylation	K186	-0.551	0.084	_EIDSKEEK(gl)YVAK_
LBR	Ubiquitylation	K190	-0.968	0.657	_YVAK(gl)ELAVR_
LBR	Phosphorylation	S357		-0.097	_NDLS(ph)PASSGNAVYDFFIGR_
LBR	Ubiquitylation	K508		0.463	_GANSQK(gl)NAFR_
LBR	Ubiquitylation	K524	-1.353		_LAHLK(gl)TIHTSTGK_
LBR	Ubiquitylation	K601	-0.777	0.355	_YGVAWEK(gl)YCQR_
PHF20	Phosphorylation	S488		-0.135	_SLEPEES(ph)PGKR_
RNF17	Ubiquitylation	K772	0.656	0.890	_ITIK(gl)DVR_
SETDB1	Ubiquitylation	K597		-3.267	_GK(gl)NPLLVPLLYDFR_
SETDB1	Phosphorylation	S1066	-0.816	-0.946	_NYGYNPS(ph)PVKPEGLR_
SMN1	Phosphorylation	S4	0.158	0.444	_(ac)AMS(ph)SGGSGGGVPEQEDSVLFR_
SMN1	Phosphorylation	S5	0.453	0.382	_(ac)AMSS(ph)GGSGGGVPEQEDSVLFR_
SMN1	Phosphorylation	S8	0.239	0.738	_(ac)AMSSGGS(ph)GGGVPEQEDSVLFR_
SMN1	Phosphorylation	T25	1.306	0.581	_GT(ph)GQSDDSDIWDDTALIK_
SMN1	Phosphorylation	S28	0.885	0.944	_GTGQS(ph)DDSDIWDDTALIK_
SMN1	Phosphorylation	S31		0.980	_RGTGQSDDS(ph)DIWDDTALIK_
SMN1	Ubiquitylation	K45	0.101	1.114	_AYDK(gl)AVASFK_
SMN1	Ubiquitylation	K51	-0.448		_AVASFK(gl)HALK_
SMN1	Ubiquitylation	K65	-0.724		_NGDICETSGK(gl)PK_
SMN1	Ubiquitylation	K83	-0.049	-0.330	_K(gl)NTAASLQQWK_
SMN1	Ubiquitylation	K93		0.896	_NTAASLQQWK(gl)VGDK_
SMN1	Ubiquitylation	K179	-1.678		_SPGNK(gl)SDNIKPK_
SMN1	Ubiquitylation	K209	-0.581	-0.285	_LGPGK(gl)PGLK_
SMN2	Phosphorylation	S4	0.158	0.444	_(ac)AMS(ph)SGGSGGGVPEQEDSVLFR_
SMN2	Phosphorylation	S5	0.453	0.382	_(ac)AMSS(ph)GGSGGGVPEQEDSVLFR_
SMN2	Phosphorylation	S8	0.239	0.738	_(ac)AMSSGGS(ph)GGGVPEQEDSVLFR_
SMN2	Phosphorylation	T25	1.306	0.581	_GT(ph)GQSDDSDIWDDTALIK_
SMN2	Phosphorylation	S28	0.885	0.944	_GTGQS(ph)DDSDIWDDTALIK_
SMN2	Phosphorylation	S31		0.980	_RGTGQSDDS(ph)DIWDDTALIK_
SMN2	Ubiquitylation	K45	0.101	1.114	_AYDK(gl)AVASFK_
SMN2	Ubiquitylation	K51	-0.448		_AVASFK(gl)HALK_
SMN2	Ubiquitylation	K65	-0.724		_NGDICETSGK(gl)PK_
SMN2	Ubiquitylation	K83	-0.049	-0.330	_K(gl)NTAASLQQWK_
SMN2	Ubiquitylation	K93		0.896	_NTAASLQQWK(gl)VGDK_
SMN2	Ubiquitylation	K179	-1.678		_SPGNK(gl)SDNIKPK_
SMN2	Ubiquitylation	K209	-0.581	-0.285	_LGPGK(gl)PGLK_
SMNDC1	Phosphorylation	S201	-0.733	-0.231	_RSIFAS(ph)PESVTGK_
SND1	Ubiquitylation	K393	0.390		_DYVAPTANLDQK(gl)DKQFVAK_
SND1	Ubiquitylation	K395	-0.551		_DYVAPTANLDQK(gl)DK_
SND1	Phosphorylation	S480	-0.486	-0.110	_KVNVTVDYIRPAS(ph)PATETVPAFSER_
SND1	Ubiquitylation	K567	1.756	0.671	_VADISGDTQK(gl)AK_
SND1	Ubiquitylation	K569	0.149		_AK(gl)QFLPFLQR_
SND1	Ubiquitylation	K695	0.801	0.852	_SSYYK(gl)SLLSAEEAAK_
SND1	Ubiquitylation	K806	0.020		_ARVEK(gl)VESPAK_
SND1	Ubiquitylation	K940	0.592	-0.128	_VITEYLNAQESAK(gl)SAR_
TDRD3	Phosphorylation	S256		0.076	_IRS(ph)EDEEDLGNARPSAPSTLFDFLESK_
TDRD7	Ubiquitylation	K576	0.029	1.028	_FCSLSFQATK(gl)CK_