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Query: KDM4B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
KDM4B 1 3.536 -0.310 -0.360

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
KDM4B Ubiquitylation K962 0.437 _AVSLGQVVITK(gl)NR_
KDM4B Phosphorylation S600 0.260 _EPVS(ph)PMELTGPEDGAASSGAGR_
KDM4B Ubiquitylation K302 0.088 _WIDYGK(gl)VATQCTCR_
KDM4B Ubiquitylation K334 -0.129 _YELWK(gl)QGK_
KDM4B Phosphorylation T1099 2.839 -0.307 _VGT(ph)PLATEDSGR_
KDM4B Ubiquitylation K1028 -0.559 _WTDGNLYK(gl)AK_
KDM4B Ubiquitylation K638 -0.589 _AGEGQAPSTFSKLK(gl)_
KDM4B Ubiquitylation K1030 -0.709 _WTDGNLYKAK(gl)_

Background Information for KDM4B:


Pubmed-KDM4B »
Uniprot-KDM4B »
Biogrid-KDM4B »
ProteomicsDB-KDM4B »

Tumorportal-KDM4B »
COSMIC-KDM4B »
GenomeRNAi-KDM4B »
Genecards-KDM4B


Protein-protein Interactions for KDM4B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CHORDC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait KDM4B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF414 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in KDM4B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_FYVE_PHD IPR011011 1.23
Category members Znf_PHD IPR001965 1.15
Category members Tudor IPR002999 0.28
Category members TF_JmjN IPR003349 0.08
Category members JmjC_dom IPR003347 0


Protein complexes (CORUM database) featuring KDM4B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring KDM4B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0016568 chromatin modification Database 0.18
Category members GO Category GO:0051213 dioxygenase activity Database 0.08
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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